RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 KRT36O76013 467 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 AP2A2O94973 939 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 AK1P00568 194 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 SERPINF2P08697 491 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 OR4Q2P0C623 313 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 RALAP11233 206 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 FCARP24071 287 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 CYP2F1P24903 491 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 PSMA2P25787 234 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 GIFP27352 417 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 PCK1P35558 622 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 MATKP42679 507 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 ACAA2P42765 397 aaKnown RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 LEPRP48357 1165 aaKnown RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 TUFMP49411 452 aaKnown RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 LIMK2P53671 638 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 DLX5P56178 289 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 RWDD2BP57060 319 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 DAOAP59103 153 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 RPL10AP62906 217 aaKnown RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 OGDHQ02218 1023 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 SCGB2A2Q13296 93 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 HNRNPDQ14103 355 aaKnown RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 EXOSC7Q15024 291 aaKnown RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 SHHQ15465 462 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 OR1C1Q15619 314 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 PSMD5Q16401 504 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 WHAMMP3Q1A5X7 153 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 CCDC14Q49A88 953 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 AGKQ53H12 422 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 FAM76BQ5HYJ3 339 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 C9orf50Q5SZB4 431 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 TPGS2Q68CL5 300 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 AFTPHQ6ULP2 937 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 ABRAXAS1Q6UWZ7 409 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 CDHR3Q6ZTQ4 885 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 Q6ZVQ6 151 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 FAM183BPQ6ZVS7 135 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 YRDCQ86U90 279 aaKnown RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 AMZ2Q86W34 360 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 CACUL1Q86Y37 369 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 DEFB106AQ8N104 65 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 UBL4BQ8N7F7 174 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 CEP112Q8N8E3 955 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 ADAD2Q8NCV1 583 aaKnown RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 OR5AP2Q8NGF4 316 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 OR4D10Q8NGI6 311 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 OR52B4Q8NGK2 314 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 ACTRT1Q8TDG2 376 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 ZNRF4Q8WWF5 429 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 RXFP2Q8WXD0 754 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 PHYHIPQ92561 330 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 NT5C3BQ969T7 300 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 AZIN2Q96A70 460 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 PIWIL1Q96J94 861 aaKnown RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 VPS39Q96JC1 886 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 B3GALT6Q96L58 329 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 LURAP1Q96LR2 239 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 MCEEQ96PE7 176 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 CNPY3Q9BT09 278 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 CARD6Q9BX69 1037 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 GOLPH3Q9H4A6 298 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 ECT2Q9H8V3 914 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 ZNF556Q9HAH1 456 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 DMAP1Q9NPF5 467 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 TECRQ9NZ01 308 aaKnown RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 IL37Q9NZH6 218 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 ERVK-18Q9QC07 812 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 PACSIN2Q9UNF0 486 aaPredicted RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 DIMT1Q9UNQ2 313 aaKnown RBP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 WDR37Q9Y2I8 494 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.48□□□□□ -1.85
PTCD3-216ENST00000487043 ANGPTL3Q9Y5C1 460 aa3.48□□□□□ -1.85
PTCD3-216ENST00000487043 NLRC5Q86WI3 1866 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 PTPRDP23468 1912 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 UQCRHLA0A096LP55 91 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 hCG_38984A0A1B0GV85 526 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 FAM92AA1XBS5 289 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 CTAGE15A4D2H0 777 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 SHISA7A6NL88 538 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 E7ENQ6 273 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 ANHXE9PGG2 379 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 C5orf67F2Z3F1 127 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 PSTPIP1O43586 416 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 UMODP07911 640 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 UQCRHP07919 91 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 KRT7P08729 469 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 HIST1H2AGP0C0S8 130 aaPredicted RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 PRSS56P0CW18 603 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 C4BPBP20851 252 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 MIPP30301 263 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 SDC4P31431 198 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 MDH1P40925 334 aaKnown RBP3.47□□□□□ -1.85
PTCD3-216ENST00000487043 ALDH3B1P43353 468 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 MARCKSL1P49006 195 aa3.47□□□□□ -1.85
PTCD3-216ENST00000487043 NUMBP49757 651 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms