RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 ARSKQ6UWY0 536 aa11.33□□□□□ -0.6
PTCD1-205ENST00000485746 MEX3BQ6ZN04 569 aaKnown RBP11.33□□□□□ -0.6
PTCD1-205ENST00000485746 MTERF4Q7Z6M4 381 aaKnown RBP11.33□□□□□ -0.6
PTCD1-205ENST00000485746 GRAMD2AQ8IUY3 354 aa11.33□□□□□ -0.6
PTCD1-205ENST00000485746 TMCO5AQ8N6Q1 288 aa11.33□□□□□ -0.6
PTCD1-205ENST00000485746 CHDHQ8NE62 594 aaPredicted RBP11.33□□□□□ -0.6
PTCD1-205ENST00000485746 RAB8BQ92930 207 aa11.33□□□□□ -0.6
PTCD1-205ENST00000485746 NEURL3Q96EH8 262 aa11.33□□□□□ -0.6
PTCD1-205ENST00000485746 THOC1Q96FV9 657 aaKnown RBP11.33□□□□□ -0.6
PTCD1-205ENST00000485746 ITCHQ96J02 903 aa11.33□□□□□ -0.6
PTCD1-205ENST00000485746 SDF2Q99470 211 aa11.33□□□□□ -0.6
PTCD1-205ENST00000485746 CCDC28BQ9BUN5 200 aa11.33□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF337Q9Y3M9 751 aa11.33□□□□□ -0.6
PTCD1-205ENST00000485746 DTNAQ9Y4J8 743 aa11.33□□□□□ -0.6
PTCD1-205ENST00000485746 FAM234BA2RU67 622 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 OR2M5A3KFT3 312 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 CLCA1A8K7I4 914 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 KDM4EB2RXH2 506 aaPredicted RBP11.32□□□□□ -0.6
PTCD1-205ENST00000485746 SHISA8B8ZZ34 492 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 C19orf84I3L1E1 186 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 BMP5P22003 454 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 CCR4P51679 360 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 RPS3AP61247 264 aaKnown RBP11.32□□□□□ -0.6
PTCD1-205ENST00000485746 CD226Q15762 336 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 SGCBQ16585 318 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 C6orf10Q5SRN2 563 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 PDZK1Q5T2W1 519 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 DNAJC14Q6Y2X3 702 aaPredicted RBP11.32□□□□□ -0.6
PTCD1-205ENST00000485746 RNF130Q86XS8 419 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 MIPOL1Q8TD10 442 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 TM9SF2Q99805 663 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 SERHL2Q9H4I8 314 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 SDR39U1Q9NRG7 319 aaPredicted RBP11.32□□□□□ -0.6
PTCD1-205ENST00000485746 MKLN1Q9UL63 735 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 CARD8Q9Y2G2 431 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 WDR45Q9Y484 360 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 AP4B1Q9Y6B7 739 aa11.32□□□□□ -0.6
PTCD1-205ENST00000485746 ASH1LQ9NR48 2969 aaKnown RBP11.32□□□□□ -0.6
PTCD1-205ENST00000485746 UQCRHLA0A096LP55 91 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 B4DXG7 233 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 TOXO94900 526 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 TMIGD3P0DMS9 266 aaPredicted RBP11.31□□□□□ -0.6
PTCD1-205ENST00000485746 UBL4AP11441 157 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF708P17019 499 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 NCF2P19878 526 aaPredicted RBP11.31□□□□□ -0.6
PTCD1-205ENST00000485746 ME2P23368 584 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 CTSSP25774 331 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 CEACAM8P31997 349 aaPredicted RBP11.31□□□□□ -0.6
PTCD1-205ENST00000485746 OPRM1P35372 400 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 CDKN2CP42773 168 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 P2RX1P51575 399 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 AGFG1P52594 562 aaKnown RBP11.31□□□□□ -0.6
PTCD1-205ENST00000485746 CLDN18P56856 261 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 B3GALT5-AS1P59052 145 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 TXNL4AP83876 142 aaKnown RBP11.31□□□□□ -0.6
PTCD1-205ENST00000485746 TIGD2Q4W5G0 525 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 KLHL26Q53HC5 615 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 PDSS1Q5T2R2 415 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 MSANTD1Q6ZTZ1 278 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 SEM1Q6ZVN7 128 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 OLIG3Q7RTU3 272 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 LIX1LQ8IVB5 337 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 MCEMP1Q8IX19 187 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 ARFGAP2Q8N6H7 521 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 OR9I1Q8NGQ6 314 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 PNPT1Q8TCS8 783 aaKnown RBP11.31□□□□□ -0.6
PTCD1-205ENST00000485746 WNT2BQ93097 391 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 VPS33AQ96AX1 596 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 ZBTB8AQ96BR9 441 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 ROPN1LQ96C74 230 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 EBF4Q9BQW3 602 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 PRRG4Q9BZD6 226 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 NMUR2Q9GZQ4 415 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 MED17Q9NVC6 651 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF629Q9UEG4 869 aaPredicted RBP11.31□□□□□ -0.6
PTCD1-205ENST00000485746 HIVEP3Q5T1R4 2406 aa11.31□□□□□ -0.6
PTCD1-205ENST00000485746 MBD3L4A6NDZ8 208 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-205ENST00000485746 MBD3L3A6NE82 208 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-205ENST00000485746 TMEM247A6NEH6 219 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 SERINC4A6NH21 518 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 MBD3L5A6NJ08 208 aaPredicted RBP11.3□□□□□ -0.6
PTCD1-205ENST00000485746 EEF1E1-BLOC1S5C9J1V9 151 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 NR5A2O00482 541 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 EIF1AYO14602 144 aaKnown RBP11.3□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF264O43296 627 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 EEF1E1O43324 174 aaKnown RBP11.3□□□□□ -0.6
PTCD1-205ENST00000485746 FCMRO60667 390 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 TNFRSF21O75509 655 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 CSTAP01040 98 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 NR2F1P10589 423 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF17P17021 662 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 UQCRC1P31930 480 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 CRATP43155 626 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF117Q03924 483 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 CBFBQ13951 182 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 NDUFAF6Q330K2 333 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 PLXDC2Q6UX71 529 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 EIF3MQ7L2H7 374 aaKnown RBP11.3□□□□□ -0.6
PTCD1-205ENST00000485746 ZNF619Q8N2I2 560 aa11.3□□□□□ -0.6
PTCD1-205ENST00000485746 C9orf106Q8NAJ2 232 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms