RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	MRPS7	Q9Y2R9	242 aa	Known RBP	3.3	□□□□□ -1.88
FN1-222	ENST00000485567	PRSS21	Q9Y6M0	314 aa		3.3	□□□□□ -1.88
FN1-222	ENST00000485567	PTCH1	Q13635	1447 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	PLEKHG2	Q9H7P9	1386 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	SF3B1	O75533	1304 aa	Known RBP eCLIP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	MYO3B	Q8WXR4	1341 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	IGHV3-16	A0A0C4DH30	117 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567		A0A1B0GTQ1	180 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	TEX48	A0A1B0GUV7	120 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	HELT	A6NFD8	242 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	RPL37AP8	A6NKH3	93 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	LRRC30	A6NM36	301 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ZNF879	B4DU55	563 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	HSBP1L1	C9JCN9	74 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	WRB	O00258	174 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	TM9SF1	O15321	606 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	AKR7A2	O43488	359 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	JAK2	O60674	1132 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	RAMP1	O60894	148 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	SDC3	O75056	442 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	UGT2B4	P06133	528 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	IVL	P07476	585 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	PABPC4L	P0CB38	370 aa	Known RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	GSTT2	P0CG29	244 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	GSTT2B	P0CG30	244 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	HSD17B1	P14061	328 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ZNF10	P21506	573 aa	Predicted RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	OXTR	P30559	389 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	CYLC1	P35663	651 aa	Predicted RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	CDKN1B	P46527	198 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	STAR	P49675	285 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ACADVL	P49748	655 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	GSK3B	P49841	420 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	STK19	P49842	368 aa	Predicted RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	EMD	P50402	254 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	SUCLG1	P53597	346 aa	Known RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ERVK11-1	P61568	191 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	PAX8	Q06710	450 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	HYAL1	Q12794	435 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	TFDP1	Q14186	410 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	EIF2B1	Q14232	305 aa	Known RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	TATDN3	Q17R31	274 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	MRGPRG-AS1	Q2M3A8	158 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	LINC01620	Q4KN68	170 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	PHYHD1	Q5SRE7	291 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	CEP85L	Q5SZL2	805 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	OTUD3	Q5T2D3	398 aa	Predicted RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ARMCX5	Q6P1M9	558 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	DEGS2	Q6QHC5	323 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	C6orf89	Q6UWU4	347 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	BTNL3	Q6UXE8	466 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	HACD2	Q6Y1H2	254 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	TSEN54	Q7Z6J9	526 aa	Known RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	BIVM	Q86UB2	503 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	CDR2L	Q86X02	465 aa	Predicted RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ERO1B	Q86YB8	467 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	CCDC65	Q8IXS2	484 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ABHD12	Q8N2K0	398 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	TCAIM	Q8N3R3	496 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	KIAA1143	Q96AT1	154 aa	Predicted RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ZNF707	Q96C28	371 aa	Predicted RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	RASD2	Q96D21	266 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ZNF597	Q96LX8	424 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	RPRD1A	Q96P16	312 aa	Predicted RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	CASD1	Q96PB1	797 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	FEM1A	Q9BSK4	669 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ESM1	Q9NQ30	184 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ABCC13	Q9NSE7	274 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	GALP	Q9UBC7	116 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	EXOSC1	Q9Y3B2	195 aa	Known RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	DDX49	Q9Y6V7	483 aa	Known RBP	3.29	□□□□□ -1.88
FN1-222	ENST00000485567	UNC13A	Q9UPW8	1703 aa		3.29	□□□□□ -1.88
FN1-222	ENST00000485567	ZCCHC6	Q5VYS8	1495 aa	Known RBP	3.28	□□□□□ -1.88
FN1-222	ENST00000485567	TRBV7-9	A0A0J9YWB2	115 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	LOC100506127	A0A0U1RQW1	187 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567		A0A1W2PPR1	153 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	OR2AG2	A6NM03	316 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	OR52A4P	A6NMU1	304 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	FOXI3	A8MTJ6	420 aa	Predicted RBP	3.28	□□□□□ -1.88
FN1-222	ENST00000485567	SPECC1L-ADORA2A	F8WAN1	911 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	CLDN5	O00501	218 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	SNN	O75324	88 aa	Predicted RBP	3.28	□□□□□ -1.88
FN1-222	ENST00000485567	RHOBTB1	O94844	696 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	ANP32D	O95626	131 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	GNA14	O95837	355 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	CSF2	P04141	144 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	OR8G3P	P0DMU2	310 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	H2AFX	P16104	143 aa	Predicted RBP	3.28	□□□□□ -1.88
FN1-222	ENST00000485567	TUBG1	P23258	451 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	PSMA2	P25787	234 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	ETV5	P41161	510 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	MFAP2	P55001	183 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	ATP5I	P56385	69 aa	Predicted RBP	3.28	□□□□□ -1.88
FN1-222	ENST00000485567	RPS8	P62241	208 aa	Known RBP	3.28	□□□□□ -1.88
FN1-222	ENST00000485567	XIAP	P98170	497 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	TPD52L1	Q16890	204 aa	Predicted RBP	3.28	□□□□□ -1.88
FN1-222	ENST00000485567	C17orf58	Q2M2W7	97 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567		Q3ZCU0	254 aa		3.28	□□□□□ -1.88
FN1-222	ENST00000485567	FAM219B	Q5XKK7	198 aa		3.28	□□□□□ -1.88

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