RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 CHDHQ8NE62 594 aaPredicted RBP17.34■□□□□ 0.37
SNX17-206ENST00000484886 B4GALNT2Q8NHY0 566 aa17.34■□□□□ 0.37
SNX17-206ENST00000484886 PIGQQ9BRB3 760 aa17.34■□□□□ 0.37
SNX17-206ENST00000484886 MED4Q9NPJ6 270 aa17.34■□□□□ 0.37
SNX17-206ENST00000484886 A0A0G2JND7 137 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 H3BML4 177 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 NUDT14O95848 222 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 NCF2P19878 526 aaPredicted RBP17.33■□□□□ 0.36
SNX17-206ENST00000484886 GRNP28799 593 aaKnown RBP17.33■□□□□ 0.36
SNX17-206ENST00000484886 ZFP36L2P47974 494 aaKnown RBP17.33■□□□□ 0.36
SNX17-206ENST00000484886 GPAT3Q53EU6 434 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 PDZK1Q5T2W1 519 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 CHMP1BQ7LBR1 199 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 MTERF4Q7Z6M4 381 aaKnown RBP17.33■□□□□ 0.36
SNX17-206ENST00000484886 LACC1Q8IV20 430 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 TMCO5AQ8N6Q1 288 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 RFWD2Q8NHY2 731 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 SMPDL3BQ92485 455 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 CHST11Q9NPF2 352 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 MKLN1Q9UL63 735 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 DTNAQ9Y4J8 743 aa17.33■□□□□ 0.36
SNX17-206ENST00000484886 ARHGAP21Q5T5U3 1957 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 A0A0G2JNJ9 132 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 KDM4EB2RXH2 506 aaPredicted RBP17.32■□□□□ 0.36
SNX17-206ENST00000484886 SHISA8B8ZZ34 492 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 TNFRSF21O75509 655 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 EPPINO95925 133 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 C1QCP02747 245 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 CPN1P15169 458 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 ADH7P40394 386 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 LHX2P50458 406 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 B3GALT5-AS1P59052 145 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 ZNF117Q03924 483 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 SQLEQ14534 574 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 AGKQ53H12 422 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 KLHL26Q53HC5 615 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.32■□□□□ 0.36
SNX17-206ENST00000484886 RIPPLY2Q5TAB7 128 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 SP5Q6BEB4 398 aaPredicted RBP17.32■□□□□ 0.36
SNX17-206ENST00000484886 ZNF787Q6DD87 383 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 ROPN1LQ96C74 230 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 TUBA1CQ9BQE3 449 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 SIKE1Q9BRV8 207 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 NMUR2Q9GZQ4 415 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 CCDC167Q9P0B6 97 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 Q9UFV3 132 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 TRIM33Q9UPN9 1127 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 CARD8Q9Y2G2 431 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 WDR45Q9Y484 360 aa17.32■□□□□ 0.36
SNX17-206ENST00000484886 A0A087WZY1 265 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 OR2M5A3KFT3 312 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 NKX2-6A6NCS4 301 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 HSPB2A8KAH6 182 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 HMGN4O00479 90 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 SEC14L5O43304 696 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 FCMRO60667 390 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 CYP7B1O75881 506 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 IL2RAP01589 272 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 VIMP08670 466 aaKnown RBP17.31■□□□□ 0.36
SNX17-206ENST00000484886 TROVE2P10155 538 aaKnown RBP eCLIP17.31■□□□□ 0.36
SNX17-206ENST00000484886 PEPDP12955 493 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 MRPL19P49406 292 aaKnown RBP17.31■□□□□ 0.36
SNX17-206ENST00000484886 CCR4P51679 360 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 CLDN18P56856 261 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 TXNL4AP83876 142 aaKnown RBP17.31■□□□□ 0.36
SNX17-206ENST00000484886 HSPB2Q16082 182 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 GLYR1Q49A26 553 aaPredicted RBP17.31■□□□□ 0.36
SNX17-206ENST00000484886 NSUN5P2Q63ZY6 315 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 HEPHL1Q6MZM0 1159 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 SLC2A7Q6PXP3 512 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 MEIOBQ8N635 442 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 TNIP2Q8NFZ5 429 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 LILRB4Q8NHJ6 448 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 ZPLD1Q8TCW7 415 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 UCK2Q9BZX2 261 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 ZNF350Q9GZX5 532 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 KCNJ16Q9NPI9 418 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 SLC6A13Q9NSD5 602 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 ZNF337Q9Y3M9 751 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 PCNX3Q9H6A9 2034 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 CACNA1CQ13936 2221 aa17.31■□□□□ 0.36
SNX17-206ENST00000484886 CLCA1A8K7I4 914 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 NPIPB9F8W1W9 429 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 LINC01387J3KSC0 135 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 SNRPB2P08579 225 aaKnown RBP17.3■□□□□ 0.36
SNX17-206ENST00000484886 NR2F1P10589 423 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 UBL4AP11441 157 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 ZNF708P17019 499 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 CRATP43155 626 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 ATP4BP51164 291 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 GUCY1A3Q02108 690 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 NDUFAF6Q330K2 333 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 GTDC1Q4AE62 458 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 COX20Q5RI15 118 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 SEM1Q6ZVN7 128 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 ZFP90Q8TF47 636 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 ZBTB8AQ96BR9 441 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 SPDL1Q96EA4 605 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 RABEP2Q9H5N1 569 aa17.3■□□□□ 0.36
SNX17-206ENST00000484886 CALHM2Q9HA72 323 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms