RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 HCKP08631 526 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 WNT2P09544 360 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 ACADSP16219 412 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 SDC1P18827 310 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 SPRP35270 261 aaPredicted RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 SLC1A4P43007 532 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 SSR1P43307 286 aaKnown RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 FNTAP49354 379 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 NOVA1P51513 510 aaKnown RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 EFNB2P52799 333 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 PRRX1P54821 245 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 COX10Q12887 443 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 C1orf61Q13536 156 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 SFT2D3Q587I9 215 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 BEND3Q5T5X7 828 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 PRAMEF20Q5VT98 475 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 FAM219BQ5XKK7 198 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 OR4F3Q6IEY1 312 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 OR8G2PQ6IF36 304 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 FBXL22Q6P050 247 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 FAHD2BQ6P2I3 314 aaPredicted RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 APTXQ7Z2E3 356 aaKnown RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 TGIF2LXQ8IUE1 241 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 BPIFB2Q8N4F0 458 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 Q8N9G6 341 aaPredicted RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 OR5L2Q8NGL0 311 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 AENQ8WTP8 325 aaKnown RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 BADQ92934 168 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 RAB3CQ96E17 227 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 FAHD2AQ96GK7 314 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 RBM14Q96PK6 669 aaKnown RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 COPS8Q99627 209 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 CHRDL1Q9BU40 450 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 RBM4Q9BWF3 364 aaKnown RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 NXF5Q9H1B4 397 aaKnown RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 SLC17A5Q9NRA2 495 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 ABCC13Q9NSE7 274 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 ZNF639Q9UID6 485 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 BARX2Q9UMQ3 279 aaPredicted RBP3.69□□□□□ -1.82
VPS13A-211ENST00000484581 POLDIP2Q9Y2S7 368 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 MEMO1Q9Y316 297 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 TIMM10BQ9Y5J6 103 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 AUP1Q9Y679 476 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 SALL1Q9NSC2 1324 aa3.69□□□□□ -1.82
VPS13A-211ENST00000484581 IGLV4-3A0A075B6K6 122 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 IGHV3OR16-12A0A075B7B8 117 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 A0A087WYN8 130 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 MEX3AA1L020 520 aaKnown RBP3.68□□□□□ -1.82
VPS13A-211ENST00000484581 LRP5LA4QPB2 252 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 FOXI3A8MTJ6 420 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-211ENST00000484581 PDHXO00330 501 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 FOXE1O00358 373 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-211ENST00000484581 NR5A2O00482 541 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 CASQ2O14958 399 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-211ENST00000484581 PGK1P00558 417 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 CA1P00915 261 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-211ENST00000484581 AGTP01019 485 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 AMBPP02760 352 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 ASGR1P07306 291 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 IMPDH1P20839 514 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 EPS15P42566 896 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 GNPDA1P46926 289 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 NDUFV3P56181 108 aaKnown RBP3.68□□□□□ -1.82
VPS13A-211ENST00000484581 RND3P61587 244 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 OTUD4Q01804 1114 aaKnown RBP3.68□□□□□ -1.82
VPS13A-211ENST00000484581 RAB40BQ12829 278 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 RCN1Q15293 331 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 SIX1Q15475 284 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-211ENST00000484581 TMEM52BQ4KMG9 183 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 C6orf226Q5I0X4 101 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 MS4A13Q5J8X5 152 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 PDZK1Q5T2W1 519 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 REP15Q6BDI9 236 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 PVRIGQ6DKI7 326 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 VITQ6UXI7 678 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 CCDC73Q6ZRK6 1079 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 PAQR7Q86WK9 346 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 ERICH1Q86X53 443 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 RNF130Q86XS8 419 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 EGFL6Q8IUX8 553 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 CLEC4FQ8N1N0 589 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 LINC01561Q8N1V8 128 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 ARL14Q8N4G2 192 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 MFSD9Q8NBP5 474 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 PRSS33Q8NF86 280 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 RFESDQ8TAC1 157 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 SCFD1Q8WVM8 642 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 CRYGNQ8WXF5 182 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 PRICKLE1Q96MT3 831 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-211ENST00000484581 LITAFQ99732 161 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 NUP58Q9BVL2 599 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 MEPEQ9NQ76 525 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-211ENST00000484581 GLRX2Q9NS18 164 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 SIGLEC8Q9NYZ4 499 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 RCOR3Q9P2K3 495 aaPredicted RBP3.68□□□□□ -1.82
VPS13A-211ENST00000484581 OARD1Q9Y530 152 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 CPQQ9Y646 472 aa3.68□□□□□ -1.82
VPS13A-211ENST00000484581 A0A075B6Q4 140 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 TEX48A0A1B0GUV7 120 aa3.67□□□□□ -1.82
VPS13A-211ENST00000484581 F5H6K3 240 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms