RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 TBC1D20Q96BZ9 403 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 VPS50Q96JG6 964 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 CLPTM1LQ96KA5 538 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 CNDP2Q96KP4 475 aaKnown RBP3.99□□□□□ -1.77
SPTA1-206ENST00000484520 EGLN2Q96KS0 407 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 ART5Q96L15 291 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 ZNF583Q96ND8 569 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 LRFN5Q96NI6 719 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 GFM1Q96RP9 751 aaKnown RBP3.99□□□□□ -1.77
SPTA1-206ENST00000484520 ZNF347Q96SE7 839 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 ZNF607Q96SK3 696 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 STACQ99469 402 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 SLC39A3Q9BRY0 314 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 GTPBP2Q9BX10 602 aaKnown RBP3.99□□□□□ -1.77
SPTA1-206ENST00000484520 AMBRA1Q9C0C7 1298 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 B3GNT4Q9C0J1 378 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 SLC7A5P2Q9GIP4 190 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 ARMC7Q9H6L4 198 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 IL21RQ9HBE5 538 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 MKKSQ9NPJ1 570 aaPredicted RBP3.99□□□□□ -1.77
SPTA1-206ENST00000484520 POLE3Q9NRF9 147 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 ZCCHC3Q9NUD5 404 aaKnown RBP3.99□□□□□ -1.77
SPTA1-206ENST00000484520 EXD2Q9NVH0 621 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 DDX18Q9NVP1 670 aaKnown RBP3.99□□□□□ -1.77
SPTA1-206ENST00000484520 TUBA8Q9NY65 449 aaPredicted RBP3.99□□□□□ -1.77
SPTA1-206ENST00000484520 SLC25A37Q9NYZ2 338 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 PRODH2Q9UF12 536 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 ANAPC2Q9UJX6 822 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 RARRES3Q9UL19 164 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 NAALAD2Q9Y3Q0 740 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 ATG4BQ9Y4P1 393 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 SNX8Q9Y5X2 465 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 TECTAO75443 2155 aa3.99□□□□□ -1.77
SPTA1-206ENST00000484520 LOC105369274A0A096LPK9 316 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 IGHV5-51A0A0C4DH38 117 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 LOC102723532A0A0G2JNH3 316 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CPED1A4D0V7 1026 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 C9JVG2 144 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 RTCAO00442 366 aaKnown RBP3.98□□□□□ -1.77
SPTA1-206ENST00000484520 NTN3O00634 580 aaPredicted RBP3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CASQ2O14958 399 aaPredicted RBP3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CASC3O15234 703 aaKnown RBP3.98□□□□□ -1.77
SPTA1-206ENST00000484520 P2RX6O15547 441 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 B4GAT1O43505 415 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 PRAMEF2O60811 474 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CTNSO60931 367 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 SH3BGRLO75368 114 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 ERAL1O75616 437 aaKnown RBP3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CREG1O75629 220 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 KRT36O76013 467 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CPSF4O95639 269 aaKnown RBP3.98□□□□□ -1.77
SPTA1-206ENST00000484520 BAG2O95816 211 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 LDLRP01130 860 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 GBAP04062 536 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 FGF5P12034 268 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CPMP14384 443 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 ETS2P15036 469 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 ANPEPP15144 967 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 PVRP15151 417 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 TCN1P20061 433 aaPredicted RBP3.98□□□□□ -1.77
SPTA1-206ENST00000484520 AGXTP21549 392 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 PCSK6P29122 969 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 IFNA8P32881 189 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CDKN2CP42773 168 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CRATP43155 626 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 GABRA4P48169 554 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 PTDSS1P48651 473 aaKnown RBP3.98□□□□□ -1.77
SPTA1-206ENST00000484520 XKP51811 444 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 ARHGDIAP52565 204 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 GFERP55789 205 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 SMIM11AP58511 58 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 DCAF7P61962 342 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 IGLV3-21P80748 117 aaPredicted RBP3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CDK6Q00534 326 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 STX4Q12846 297 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 EPS8Q12929 822 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 HSPB3Q12988 150 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 SRSF5Q13243 272 aaKnown RBP3.98□□□□□ -1.77
SPTA1-206ENST00000484520 GAB1Q13480 694 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 SCARB2Q14108 478 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 ATP6AP1Q15904 470 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 RFX4Q33E94 735 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 EIPR1Q53HC9 387 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CMPK2Q5EBM0 449 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 GLYATQ6IB77 296 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 FRMPD2BQ6IN97 320 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 GUSBP11Q6P575 273 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CEACAM20Q6UY09 585 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 RBM44Q6ZP01 1051 aaKnown RBP3.98□□□□□ -1.77
SPTA1-206ENST00000484520 LRRC74BQ6ZQY2 392 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 QSOX2Q6ZRP7 698 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 C6orf120Q7Z4R8 191 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 ARHGAP22Q7Z5H3 698 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CYP4Z1Q86W10 505 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 ANKRD46Q86W74 232 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 IFNEQ86WN2 208 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 PPP1R3BQ86XI6 285 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 ARMC8Q8IUR7 673 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 MSRB3Q8IXL7 192 aa3.98□□□□□ -1.77
SPTA1-206ENST00000484520 CLECL1Q8IZS7 167 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms