RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 RANBP3LQ86VV4 465 aaPredicted RBP2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 GPBP1Q86WP2 473 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 VSTM4Q8IW00 320 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 SYCE1Q8N0S2 351 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 ELMOD1Q8N336 334 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 TCAIMQ8N3R3 496 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 CLDN19Q8N6F1 224 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 CSGALNACT2Q8N6G5 542 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 SUMF1Q8NBK3 374 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 OR4C15Q8NGM1 316 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 OR4L1Q8NH43 312 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 WDR36Q8NI36 951 aaKnown RBP2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 RDH11Q8TC12 318 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 SAP25Q8TEE9 199 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 NPRL2Q8WTW4 380 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 PIGCQ92535 297 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 PIK3R3Q92569 461 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 P3H4Q92791 437 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 SLC38A4Q969I6 547 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 EFHD2Q96C19 240 aaPredicted RBP2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 SLC25A36Q96CQ1 311 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 C4orf45Q96LM5 186 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 PRRC1Q96M27 445 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 C1orf147Q96MC9 270 aaPredicted RBP2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 TGM7Q96PF1 710 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 CITED1Q99966 193 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 OVOL2Q9BRP0 275 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 PARD6BQ9BYG5 372 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 SLC7A5P2Q9GIP4 190 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 BLZF1Q9H2G9 400 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 DPEP2Q9H4A9 486 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 TUBB1Q9H4B7 451 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 RGCCQ9H4X1 137 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 C5orf66Q9H5L9 145 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 C8orf33Q9H7E9 229 aaPredicted RBP2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 KAT8Q9H7Z6 458 aaKnown RBP2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 CALHM2Q9HA72 323 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 ELOVL3Q9HB03 270 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 AGPAT3Q9NRZ7 376 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 UFSP2Q9NUQ7 469 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 MED17Q9NVC6 651 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 NLGN3Q9NZ94 848 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 THAP10Q9P2Z0 257 aaPredicted RBP2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 DBF4Q9UBU7 674 aaPredicted RBP2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 NCKAP1Q9Y2A7 1128 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 NSG2Q9Y328 171 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 ATG4BQ9Y4P1 393 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 PPIAL4AQ9Y536 164 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 ETV7Q9Y603 341 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 BZW2Q9Y6E2 419 aaKnown RBP2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 FGD5Q6ZNL6 1462 aa2.38□□□□□ -2.03
LAPTM4A-202ENST00000483117 ATRXP46100 2492 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 CCDC7Q96M83 1385 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 KIF27Q86VH2 1401 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 TRBV11-1A0A0K0K1C0 115 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 METTL21EPA6NDL7 271 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 BTBD17A6NE02 478 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 CCDC182A6NF36 153 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 NPIPA7E9PJI5 369 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 GOLGA8TH3BQL2 631 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 PSMD11O00231 422 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 BTN3A3O00478 584 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 LSM1O15116 133 aaKnown RBP2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 CFLARO15519 480 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 PHF1O43189 567 aaPredicted RBP2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 TIMM8AO60220 97 aaPredicted RBP2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 TSPAN2O60636 221 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 SNAP91O60641 907 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 GALR3O60755 368 aaPredicted RBP2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 UPK3AO75631 287 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 STK17BO94768 372 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 GOT2P00505 430 aaKnown RBP2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 FTH1P02794 183 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 ATP1B1P05026 303 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 NPIPA8P0DM63 369 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 PRKAR1AP10644 381 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 ACKR3P25106 362 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 DUTP33316 252 aaKnown RBP2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 SEC61GP60059 68 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 IL9RQ01113 521 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 PJVKQ0ZLH3 352 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 BST2Q10589 180 aaKnown RBP2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 GPR50Q13585 617 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 GRB14Q14449 540 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 P2RY14Q15391 338 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 TAB1Q15750 504 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 ZNF528Q3MIS6 628 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 LIPKQ5VXJ0 399 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 PLPP4Q5VZY2 271 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 LIPJQ5W064 366 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 TCEAL6Q6IPX3 200 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 C6orf89Q6UWU4 347 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 TMEM107Q6UX40 140 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 VITQ6UXI7 678 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 DPY19L2P2Q6ZN68 376 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 RFPL4BQ6ZWI9 263 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 UTS2BQ765I0 119 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 TIPARPQ7Z3E1 657 aaKnown RBP2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 CCDC50Q8IVM0 306 aa2.37□□□□□ -2.03
LAPTM4A-202ENST00000483117 EFCAB13Q8IY85 973 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms