RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 BHLHB9Q6PI77 547 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 SLC36A4Q6YBV0 504 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 OR4N4Q8N0Y3 316 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 RIT1Q92963 219 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 LINC00052Q96N35 136 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 PINK1Q9BXM7 581 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 SAP130Q9H0E3 1048 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 IL23AQ9NPF7 189 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 PRSS16Q9NQE7 514 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 MBNL1Q9NR56 388 aaKnown RBP16.85■□□□□ 0.29
SSR4-209ENST00000482902 CXXC1Q9P0U4 656 aaPredicted RBP16.85■□□□□ 0.29
SSR4-209ENST00000482902 ATG4BQ9Y4P1 393 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 KCNMB2Q9Y691 235 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 A0A0G2JPF8 293 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 A0A1W2PR48 441 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 IRGMA1A4Y4 181 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 CD8B2A6NJW9 211 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 HNRNPCL2B2RXH8 293 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 HNRNPCL3B7ZW38 293 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 H3BUI4 141 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 GPR171O14626 319 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 CASC3O15234 703 aaKnown RBP16.85■□□□□ 0.29
SSR4-209ENST00000482902 ERI3O43414 337 aaKnown RBP16.85■□□□□ 0.29
SSR4-209ENST00000482902 HRO43593 1189 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 NDUFA2O43678 99 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 HNRNPCL4P0DMR1 293 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 CD8BP10966 210 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 HOXB3P14651 431 aaPredicted RBP16.85■□□□□ 0.29
SSR4-209ENST00000482902 DNASE1P24855 282 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 MTNR1AP48039 350 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 TAS2R41P59536 307 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 CRYZQ08257 329 aaKnown RBP16.85■□□□□ 0.29
SSR4-209ENST00000482902 MINDY4Q4G0A6 757 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 LHFPL3Q86UP9 236 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 TTLQ8NG68 377 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 OR5M3Q8NGP4 307 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 ST8SIA4Q92187 359 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 CNRIP1Q96F85 164 aaPredicted RBP16.85■□□□□ 0.29
SSR4-209ENST00000482902 CAMK1GQ96NX5 476 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 C1QTNF6Q9BXI9 259 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 DPAGT1Q9H3H5 408 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 DLL4Q9NR61 685 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 ACSL5Q9ULC5 683 aa16.85■□□□□ 0.29
SSR4-209ENST00000482902 CKAP5Q14008 2032 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 A0A1B0GVI7 797 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 FAM170BA6NMN3 283 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 G3V3Q6 166 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 EEF1E1O43324 174 aaKnown RBP16.84■□□□□ 0.29
SSR4-209ENST00000482902 FRS3O43559 492 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 SULT1A3P0DMM9 295 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 SULT1A4P0DMN0 295 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 SLC1A3P43003 542 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 RAB28P51157 221 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 MAP4K2Q12851 820 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 PRICKLE2Q7Z3G6 844 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 SPRED2Q7Z698 418 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 OR8D4Q8NGM9 314 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 SFXN5Q8TD22 340 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 GNPDA2Q8TDQ7 276 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 ACOT12Q8WYK0 555 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 FBXW5Q969U6 566 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 REG4Q9BYZ8 158 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 SLC7A5P2Q9GIP4 190 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 MAB21L2Q9Y586 359 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 NUBP2Q9Y5Y2 271 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 hCG_1807616A0A1W2PRN6 198 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 A0A1W2PS29 197 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 TCRBP04435 133 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 EIF4EP06730 217 aaKnown RBP16.84■□□□□ 0.29
SSR4-209ENST00000482902 CELP19835 753 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 HIST1H1TP22492 207 aaPredicted RBP16.84■□□□□ 0.29
SSR4-209ENST00000482902 VSX2P58304 361 aaPredicted RBP16.84■□□□□ 0.29
SSR4-209ENST00000482902 RAB8AP61006 207 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 MLLT1Q03111 559 aaPredicted RBP16.84■□□□□ 0.29
SSR4-209ENST00000482902 ZIC1Q15915 447 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 ZNF311Q5JNZ3 666 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 FAM78AQ5JUQ0 283 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 EOGTQ5NDL2 527 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 CHMP1BQ7LBR1 199 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 LRRC28Q86X40 367 aaPredicted RBP16.84■□□□□ 0.29
SSR4-209ENST00000482902 GPR135Q8IZ08 494 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 OR52H1Q8NGJ2 320 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 OR10Z1Q8NGY1 313 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 SMG7Q92540 1137 aaKnown RBP16.84■□□□□ 0.29
SSR4-209ENST00000482902 MS4A6EQ96DS6 147 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 PAWRQ96IZ0 340 aaKnown RBP16.84■□□□□ 0.29
SSR4-209ENST00000482902 RADILQ96JH8 1075 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 TRMT61BQ9BVS5 477 aaKnown RBP16.84■□□□□ 0.29
SSR4-209ENST00000482902 RBCK1Q9BYM8 510 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 CNIH4Q9P003 139 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 CBLCQ9ULV8 474 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 ENTPD4Q9Y227 616 aa16.84■□□□□ 0.29
SSR4-209ENST00000482902 UBXN7O94888 489 aa16.83■□□□□ 0.28
SSR4-209ENST00000482902 NTN1O95631 604 aa16.83■□□□□ 0.28
SSR4-209ENST00000482902 IFNA16P05015 189 aa16.83■□□□□ 0.28
SSR4-209ENST00000482902 SRP9P49458 86 aaKnown RBP16.83■□□□□ 0.28
SSR4-209ENST00000482902 CLEC12AQ5QGZ9 265 aa16.83■□□□□ 0.28
SSR4-209ENST00000482902 IDNKQ5T6J7 187 aa16.83■□□□□ 0.28
SSR4-209ENST00000482902 IL20RBQ6UXL0 311 aa16.83■□□□□ 0.28
SSR4-209ENST00000482902 PIAS4Q8N2W9 510 aaPredicted RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms