RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 LRRC70Q7Z2Q7 622 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 DPY19L4Q7Z388 723 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 ZNF584Q8IVC4 421 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 FBXO16Q8IX29 292 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-210ENST00000482158 ZBED8Q8IZ13 594 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 TEX9Q8N6V9 391 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 OR10T2Q8NGX3 314 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 PSMG2Q969U7 264 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 FAF2Q96CS3 445 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 SERAC1Q96JX3 654 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 NOL4LQ96MY1 436 aaPredicted RBP4.13□□□□□ -1.75
SF3B1-210ENST00000482158 C19orf24Q9BVV8 132 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 EPS15L1Q9UBC2 864 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 SPRR3Q9UBC9 169 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 CLEC4EQ9ULY5 219 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 CA5BQ9Y2D0 317 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 GSTK1Q9Y2Q3 226 aa4.13□□□□□ -1.75
SF3B1-210ENST00000482158 F10P00742 488 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 KRT8P05787 483 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 NT5EP21589 574 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 ATP5A1P25705 553 aaKnown RBP4.12□□□□□ -1.75
SF3B1-210ENST00000482158 GNPDA1P46926 289 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 NUCB2P80303 420 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 ELP6Q0PNE2 266 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 KIAA0040Q15053 153 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 C9orf129Q5T035 196 aaKnown RBP4.12□□□□□ -1.75
SF3B1-210ENST00000482158 OLFML2AQ68BL7 652 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 OR8G2PQ6IF36 304 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 APOBEC3FQ8IUX4 373 aaKnown RBP4.12□□□□□ -1.75
SF3B1-210ENST00000482158 UBQLNLQ8IYU4 475 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 OR2T34Q8NGX1 318 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 SYAP1Q96A49 352 aaPredicted RBP4.12□□□□□ -1.75
SF3B1-210ENST00000482158 KIR2DL4Q99706 377 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 ZNF702PQ9H963 129 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 TMOD2Q9NZR1 351 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 APOBEC3BQ9UH17 382 aaKnown RBP4.12□□□□□ -1.75
SF3B1-210ENST00000482158 XPO7Q9UIA9 1087 aaKnown RBP4.12□□□□□ -1.75
SF3B1-210ENST00000482158 RIMS3Q9UJD0 308 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 AP1M2Q9Y6Q5 423 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 KIF25-AS1Q9Y6Z4 181 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 SPACA6W5XKT8 324 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 CHD4Q14839 1912 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 LRRK1Q38SD2 2015 aa4.12□□□□□ -1.75
SF3B1-210ENST00000482158 OR6C65A6NJZ3 312 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 OR1F1O43749 312 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 ZNF254O75437 659 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 CABYRO75952 493 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 HSPA5P11021 654 aaKnown RBP4.11□□□□□ -1.75
SF3B1-210ENST00000482158 EPB41P11171 864 aaKnown RBP4.11□□□□□ -1.75
SF3B1-210ENST00000482158 ZP3P21754 424 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 PAX7P23759 505 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 RPL32P62910 135 aaKnown RBP4.11□□□□□ -1.75
SF3B1-210ENST00000482158 MRPS11P82912 194 aaKnown RBP4.11□□□□□ -1.75
SF3B1-210ENST00000482158 EWSR1Q01844 656 aaKnown RBP eCLIP4.11□□□□□ -1.75
SF3B1-210ENST00000482158 BDH1Q02338 343 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 CXCL17Q6UXB2 119 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 TRUB1Q8WWH5 349 aaKnown RBP4.11□□□□□ -1.75
SF3B1-210ENST00000482158 SDSLQ96GA7 329 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 CITED1Q99966 193 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 CAB39LQ9H9S4 337 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 PALMDQ9NP74 551 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 PAK1IP1Q9NWT1 392 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-210ENST00000482158 WRAP73Q9P2S5 460 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-210ENST00000482158 SH3BGRL2Q9UJC5 107 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 KIF3AQ9Y496 699 aa4.11□□□□□ -1.75
SF3B1-210ENST00000482158 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-210ENST00000482158 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-210ENST00000482158 ZSCAN12O43309 604 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 GPX5O75715 221 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 TM7SF2O76062 418 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 MFN2O95140 757 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 TSPY4P0CV99 314 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 TSPY10P0CW01 314 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 CLUP10909 449 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 CPN1P15169 458 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 PSMA2P25787 234 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 CA8P35219 290 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 KRTAP10-3P60369 221 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 LAGE3Q14657 143 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 RABGAP1LQ5R372 815 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 SLC25A24Q6NUK1 477 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 ACSM5Q6NUN0 579 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 TMEM17Q86X19 198 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 IL1F10Q8WWZ1 152 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 RAB7BQ96AH8 199 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 HAVCR1Q96D42 359 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 SLC25A38Q96DW6 304 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 PPDPFQ9H3Y8 114 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 CGNQ9P2M7 1197 aaKnown RBP4.1□□□□□ -1.75
SF3B1-210ENST00000482158 KLHL21Q9UJP4 597 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 BLOC1S6Q9UL45 172 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 FLVCR1Q9Y5Y0 555 aa4.1□□□□□ -1.75
SF3B1-210ENST00000482158 H3BMQ9 156 aa4.09□□□□□ -1.75
SF3B1-210ENST00000482158 PGK1P00558 417 aa4.09□□□□□ -1.75
SF3B1-210ENST00000482158 IGHV3-23P01764 117 aa4.09□□□□□ -1.75
SF3B1-210ENST00000482158 PCCBP05166 539 aa4.09□□□□□ -1.75
SF3B1-210ENST00000482158 TBXA2RP21731 343 aa4.09□□□□□ -1.75
SF3B1-210ENST00000482158 PRKAR2BP31323 418 aa4.09□□□□□ -1.75
SF3B1-210ENST00000482158 RPL29P47914 159 aaKnown RBP4.09□□□□□ -1.75
SF3B1-210ENST00000482158 RIPPLY3P57055 190 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms