RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 ROS1P08922 2347 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 A0A0J9YW62 118 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 SS18L1O75177 396 aaPredicted RBP16.86■□□□□ 0.29
ABCF3-214ENST00000480562 SYNGR4O95473 234 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 CHEK2O96017 543 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 CHRNGP07510 517 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 BCKDHAP12694 445 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 HPGDP15428 266 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 RNF144AP50876 292 aaPredicted RBP16.86■□□□□ 0.29
ABCF3-214ENST00000480562 CD226Q15762 336 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 CPTPQ5TA50 214 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 RNF165Q6ZSG1 346 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 DDIASQ8IXT1 998 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 OR2V1Q8NHB1 315 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 POC1BQ8TC44 478 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 ZBTB8AQ96BR9 441 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 FAM120BQ96EK7 910 aaKnown RBP16.86■□□□□ 0.29
ABCF3-214ENST00000480562 CHMP6Q96FZ7 201 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 Q96MF0 132 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 TRMOQ9BU70 441 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 PPCSQ9HAB8 311 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 UBQLN4Q9NRR5 601 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 SIRT3Q9NTG7 399 aaPredicted RBP16.86■□□□□ 0.29
ABCF3-214ENST00000480562 GIMAP2Q9UG22 337 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 MID2Q9UJV3 735 aa16.86■□□□□ 0.29
ABCF3-214ENST00000480562 MCTS1Q9ULC4 181 aaKnown RBP16.86■□□□□ 0.29
ABCF3-214ENST00000480562 ABCA2Q9BZC7 2435 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 C7orf72A4D263 438 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 H7C1Q1 480 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 ADAMDEC1O15204 470 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 LY6G6DO95868 133 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 IL11P20809 199 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 ASMTP46597 345 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 PRIM2P49643 509 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 ZNF41P51814 821 aaPredicted RBP16.85■□□□□ 0.29
ABCF3-214ENST00000480562 RAC1P63000 192 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 EXOSC6Q5RKV6 272 aaKnown RBP16.85■□□□□ 0.29
ABCF3-214ENST00000480562 B4GALNT2Q8NHY0 566 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 PPP1R14CQ8TAE6 165 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 ACTRT2Q8TDY3 377 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 TWIST2Q8WVJ9 160 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 CAVIN3Q969G5 261 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 HHATLQ9HCP6 504 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 TMED5Q9Y3A6 229 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 DSCAMO60469 2012 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 HEATR5AQ86XA9 2040 aa16.85■□□□□ 0.29
ABCF3-214ENST00000480562 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.84■□□□□ 0.29
ABCF3-214ENST00000480562 SCDO00767 359 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 PIP5K1BO14986 540 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 KLF4O43474 513 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 SHC1P29353 583 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 ALDH3A1P30838 453 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 SERPINB4P48594 390 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 POU6F2P78424 691 aaPredicted RBP16.84■□□□□ 0.29
ABCF3-214ENST00000480562 LASP1Q14847 261 aaKnown RBP16.84■□□□□ 0.29
ABCF3-214ENST00000480562 UGT3A2Q3SY77 523 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 HBMQ6B0K9 141 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 ZCCHC12Q6PEW1 402 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 STAC2Q6ZMT1 411 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 C20orf204Q6ZNR8 217 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 ESPNLQ6ZVH7 1005 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 R3HCC1LQ7Z5L2 792 aaKnown RBP16.84■□□□□ 0.29
ABCF3-214ENST00000480562 YTHDF3Q7Z739 585 aaKnown RBP16.84■□□□□ 0.29
ABCF3-214ENST00000480562 OR7A2PQ8NGA2 310 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 AGR3Q8TD06 166 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 NUDT8Q8WV74 236 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 CDS1Q92903 461 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 MTERF3Q96E29 417 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 COX4I2Q96KJ9 171 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 BTBD2Q9BX70 525 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 C12orf49Q9H741 205 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 ZCCHC3Q9NUD5 404 aaKnown RBP16.84■□□□□ 0.29
ABCF3-214ENST00000480562 PAQR5Q9NXK6 330 aaPredicted RBP16.84■□□□□ 0.29
ABCF3-214ENST00000480562 GIN1Q9NXP7 522 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 ATP6V1HQ9UI12 483 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 TRAF6Q9Y4K3 522 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 SNX8Q9Y5X2 465 aa16.84■□□□□ 0.29
ABCF3-214ENST00000480562 FN1P02751 2386 aaKnown RBP16.84■□□□□ 0.29
ABCF3-214ENST00000480562 NPIPA5A0A0B4J1W7 369 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 TLDC2A0PJX2 215 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 TRIM64A6NGJ6 449 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 TRIM64BA6NI03 449 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 NPIPA7E9PJI5 369 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 SMAD7O15105 426 aaKnown RBP16.83■□□□□ 0.28
ABCF3-214ENST00000480562 SCAMP2O15127 329 aaKnown RBP16.83■□□□□ 0.28
ABCF3-214ENST00000480562 OIP5O43482 229 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 HMGN2P05204 90 aaKnown RBP16.83■□□□□ 0.28
ABCF3-214ENST00000480562 HEXAP06865 529 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 FGF4P08620 206 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 NPIPA8P0DM63 369 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 LAMP1P11279 417 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 ME2P23368 584 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 LCN1P31025 176 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 SFTPDP35247 375 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 HPCAL1P37235 193 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 ARL13AQ5H913 290 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-214ENST00000480562 BEX5Q5H9J7 111 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 RAI1Q7Z5J4 1906 aaPredicted RBP16.83■□□□□ 0.28
ABCF3-214ENST00000480562 WFDC8Q8IUA0 241 aa16.83■□□□□ 0.28
ABCF3-214ENST00000480562 MISPQ8IVT2 679 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms