RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 TXNL4AP83876 142 aaKnown RBP11.15□□□□□ -0.62
TRA2B-212ENST00000480461 SNTA1Q13424 505 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 ART3Q13508 389 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 NDUFAF6Q330K2 333 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 FLYWCH1Q4VC44 716 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 PDZK1Q5T2W1 519 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 GCNT6Q5T4J0 391 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 TIGD3Q6B0B8 471 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 SLC30A6Q6NXT4 461 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 SIAH3Q8IW03 269 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 GATSQ8NAP1 163 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 NFKBIDQ8NI38 313 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 HOPXQ9BPY8 73 aaPredicted RBP11.15□□□□□ -0.62
TRA2B-212ENST00000480461 DOHHQ9BU89 302 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 RAD21L1Q9H4I0 556 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 TMEM38AQ9H6F2 299 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 MTHFD2LQ9H903 347 aaPredicted RBP11.15□□□□□ -0.62
TRA2B-212ENST00000480461 BCL2L10Q9HD36 194 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 ASF1BQ9NVP2 202 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 PACSIN3Q9UKS6 424 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 WDR45Q9Y484 360 aa11.15□□□□□ -0.62
TRA2B-212ENST00000480461 NF1P21359 2839 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 DSPPQ9NZW4 1301 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 EXPH5Q8NEV8 1989 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 SETD2Q9BYW2 2564 aaPredicted RBP11.14□□□□□ -0.63
TRA2B-212ENST00000480461 NINQ8N4C6 2090 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 AGAP5A6NIR3 686 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 B2RBV5 119 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 ZNHIT1O43257 154 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 ANGPTL1O95841 491 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 ESRRAP11474 423 aaPredicted RBP11.14□□□□□ -0.63
TRA2B-212ENST00000480461 ATP6V1C1P21283 382 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 RPS4Y1P22090 263 aaKnown RBP11.14□□□□□ -0.63
TRA2B-212ENST00000480461 SLC7A2P52569 658 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 CRYBA2P53672 197 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 KCNJ2P63252 427 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 CDK6Q00534 326 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 HYAL4Q2M3T9 481 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 CBLN3Q6UW01 205 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 SERPINA11Q86U17 422 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 COMTD1Q86VU5 262 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 LSRQ86X29 649 aaPredicted RBP11.14□□□□□ -0.63
TRA2B-212ENST00000480461 ZNF619Q8N2I2 560 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 TMEM251Q8N6I4 163 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 RBM15BQ8NDT2 890 aaKnown RBP11.14□□□□□ -0.63
TRA2B-212ENST00000480461 ARSGQ96EG1 525 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 TMEM41AQ96HV5 264 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 JSRP1Q96MG2 331 aaPredicted RBP11.14□□□□□ -0.63
TRA2B-212ENST00000480461 OSBPL11Q9BXB4 747 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 TTTY12Q9BZ98 90 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 HOXD1Q9GZZ0 328 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 TSPAN10Q9H1Z9 355 aaPredicted RBP11.14□□□□□ -0.63
TRA2B-212ENST00000480461 UBQLN3Q9H347 655 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 ZFP64Q9NPA5 681 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 POLE3Q9NRF9 147 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 KLRF1Q9NZS2 232 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 MED11Q9P086 117 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 TMEM181Q9P2C4 612 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 P2RX2Q9UBL9 471 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 FBXL2Q9UKC9 423 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 ABCG2Q9UNQ0 655 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 DTNAQ9Y4J8 743 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 WIF1Q9Y5W5 379 aa11.14□□□□□ -0.63
TRA2B-212ENST00000480461 PDZD2O15018 2839 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 IGLV3-32A0A0A0MS00 114 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 A0A0G2JPF8 293 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 A0A1W2PQD3 144 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 SERINC4A6NH21 518 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 FAM166BA8MTA8 275 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 TMEM229AB2RXF0 380 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 HNRNPCL2B2RXH8 293 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 HNRNPCL3B7ZW38 293 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 SNPHO15079 494 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 HS6ST1O60243 411 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 ZIC3O60481 467 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 TPST1O60507 370 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 HNRNPCL1O60812 293 aaKnown RBP11.13□□□□□ -0.63
TRA2B-212ENST00000480461 ADAM11O75078 769 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 EPPINO95925 133 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 HNRNPCL4P0DMR1 293 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 PRF1P14222 555 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 MAGEA5P43359 124 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 ANXA11P50995 505 aaKnown RBP11.13□□□□□ -0.63
TRA2B-212ENST00000480461 PCBP3P57721 371 aaKnown RBP11.13□□□□□ -0.63
TRA2B-212ENST00000480461 PPIAP62937 165 aaKnown RBP11.13□□□□□ -0.63
TRA2B-212ENST00000480461 RPP38P78345 283 aaKnown RBP11.13□□□□□ -0.63
TRA2B-212ENST00000480461 LIPEQ05469 1076 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 SCARB2Q14108 478 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 CMPK2Q5EBM0 449 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 TBCELQ5QJ74 424 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 REEP3Q6NUK4 255 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 VRK2Q86Y07 508 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 CLIP4Q8N3C7 705 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 FADS6Q8N9I5 356 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 OR2M3Q8NG83 312 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 FAR1Q8WVX9 515 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 SLC7A6OSQ96CW6 309 aaPredicted RBP11.13□□□□□ -0.63
TRA2B-212ENST00000480461 NPAS1Q99742 590 aa11.13□□□□□ -0.63
TRA2B-212ENST00000480461 SH3GL1Q99961 368 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms