RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 SLC22A2O15244 555 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 KIAA0513O60268 411 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 ZG16O60844 167 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 EPPINO95925 133 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 ZNF17P17021 662 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 NCF2P19878 526 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-217ENST00000479161 ADH6P28332 368 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 ARFIP2P53365 341 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 B3GALT5-AS1P59052 145 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 ADORA2A-AS1P86434 159 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 TOMM20Q15388 145 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 AGKQ53H12 422 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 PRAMEF8Q5VWM4 474 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 PRAMEF7Q5VXH5 474 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 OR5M10Q6IEU7 315 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 TNFAIP8L2Q6P589 184 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-217ENST00000479161 B3GNT6Q6ZMB0 384 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 YRDCQ86U90 279 aaKnown RBP14.03□□□□□ -0.16
C9orf3-217ENST00000479161 ULK2Q8IYT8 1036 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 METTL25Q8N6Q8 603 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 ZBTB8AQ96BR9 441 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 ARSGQ96EG1 525 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 OTUB1Q96FW1 271 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-217ENST00000479161 WDYHV1Q96HA8 205 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 PIGQQ9BRB3 760 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 TTYH2Q9BSA4 534 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 TMEM120AQ9BXJ8 343 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 MTHFD2LQ9H903 347 aaPredicted RBP14.03□□□□□ -0.16
C9orf3-217ENST00000479161 CALHM2Q9HA72 323 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 SLC6A13Q9NSD5 602 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 CALML5Q9NZT1 146 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 MED11Q9P086 117 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 STOML1Q9UBI4 398 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 DKKL1Q9UK85 242 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 WDR45Q9Y484 360 aa14.03□□□□□ -0.16
C9orf3-217ENST00000479161 DOCK7Q96N67 2140 aa14.02□□□□□ -0.16
C9orf3-217ENST00000479161 TRBV5-3A0A0A0MS03 114 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 CD8B2A6NJW9 211 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 CLIC1O00299 241 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 ETV2O00321 342 aaPredicted RBP14.02□□□□□ -0.17
C9orf3-217ENST00000479161 FCMRO60667 390 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 UGT2B17O75795 530 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 GSNP06396 782 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 RNF224P0DH78 156 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 PEPDP12955 493 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 CAPN3P20807 821 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 TIMP3P35625 211 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 EIF1P41567 113 aaKnown RBP14.02□□□□□ -0.17
C9orf3-217ENST00000479161 FUT5Q11128 374 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 GNA13Q14344 377 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 ZSWIM7Q19AV6 140 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 COQ5Q5HYK3 327 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 C6orf10Q5SRN2 563 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.02□□□□□ -0.17
C9orf3-217ENST00000479161 C1orf185Q5T7R7 199 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 RTL6Q6ICC9 239 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 TYW3Q6IPR3 259 aaKnown RBP14.02□□□□□ -0.17
C9orf3-217ENST00000479161 CGB2Q6NT52 195 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 MRGPRGQ86SM5 289 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 ADGRE4PQ86SQ3 457 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 CMIPQ8IY22 773 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 ZNF619Q8N2I2 560 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 GTPBP8Q8N3Z3 284 aaPredicted RBP14.02□□□□□ -0.17
C9orf3-217ENST00000479161 B4GALNT2Q8NHY0 566 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 ASB5Q8WWX0 329 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 RND1Q92730 232 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 LEF1Q9UJU2 399 aaPredicted RBP14.02□□□□□ -0.17
C9orf3-217ENST00000479161 ICAM5Q9UMF0 924 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 CORO2BQ9UQ03 480 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 SLC35A3Q9Y2D2 325 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 SLC6A5Q9Y345 797 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 FAM215AQ9Y5M1 114 aa14.02□□□□□ -0.17
C9orf3-217ENST00000479161 INTS1Q8N201 2190 aaKnown RBP14.02□□□□□ -0.17
C9orf3-217ENST00000479161 PRAMEF27A3QJZ7 478 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 SERINC4A6NH21 518 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 NPPAP01160 153 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 ZNF708P17019 499 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 LHX2P50458 406 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 P2RX1P51575 399 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 DLX5P56178 289 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 EEFSECP57772 596 aaKnown RBP14.01□□□□□ -0.17
C9orf3-217ENST00000479161 RGNQ15493 299 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 CD226Q15762 336 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 RIPPLY2Q5TAB7 128 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 NSUN5P2Q63ZY6 315 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 ZNF585AQ6P3V2 769 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 SLC2A7Q6PXP3 512 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 FRRS1Q6ZNA5 592 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 MAMDC2Q7Z304 686 aaPredicted RBP14.01□□□□□ -0.17
C9orf3-217ENST00000479161 GALNT10Q86SR1 603 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 LACC1Q8IV20 430 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 FAM71CQ8NEG0 241 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 OR5M9Q8NGP3 310 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 PHOSPHO1Q8TCT1 267 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 RAB8BQ92930 207 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 SFXN2Q96NB2 322 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 LAT2Q9GZY6 243 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 SLC38A1Q9H2H9 487 aa14.01□□□□□ -0.17
C9orf3-217ENST00000479161 EXOSC3Q9NQT5 275 aaKnown RBP14.01□□□□□ -0.17
C9orf3-217ENST00000479161 COQ3Q9NZJ6 369 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms