RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 CCKARP32238 428 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 ETV5P41161 510 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 TGFB2P61812 414 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 ACY1Q03154 408 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 KIAA1644Q3SXP7 199 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 PERM1Q5SV97 790 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 AVPI1Q5T686 147 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 CST9LP1Q5W188 147 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 BLOC1S3Q6QNY0 202 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 LSRQ86X29 649 aaPredicted RBP5.15□□□□□ -1.58
USF3-202ENST00000478658 STT3BQ8TCJ2 826 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 PITX2Q99697 317 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 UQCC2Q9BRT2 126 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 POLDIP3Q9BY77 421 aaKnown RBP5.15□□□□□ -1.58
USF3-202ENST00000478658 TKTL2Q9H0I9 626 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 ANKRD19PQ9H560 264 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 NMNAT1Q9HAN9 279 aaPredicted RBP5.15□□□□□ -1.58
USF3-202ENST00000478658 CPNE5Q9HCH3 593 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 ADAP2Q9NPF8 381 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 FAM120CQ9NX05 1096 aaKnown RBP5.15□□□□□ -1.58
USF3-202ENST00000478658 ING1Q9UK53 422 aaPredicted RBP5.15□□□□□ -1.58
USF3-202ENST00000478658 FBXO5Q9UKT4 447 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 A0A0A6YYH2 397 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 A0A1B0GTW7 788 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 A6NJ64 397 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 CPSF4LA6NMK7 179 aaKnown RBP5.15□□□□□ -1.58
USF3-202ENST00000478658 DCXO43602 365 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 RFPL1O75677 317 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 RECQL4O94761 1208 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 SLITRK5O94991 958 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 SGPL1O95470 568 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 DHRS4L1P0CG22 281 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 AK4P27144 223 aaPredicted RBP5.15□□□□□ -1.58
USF3-202ENST00000478658 BMPR1AP36894 532 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 RPL24P83731 157 aaKnown RBP5.15□□□□□ -1.58
USF3-202ENST00000478658 TP53I3Q53FA7 332 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 LRRC28Q86X40 367 aaPredicted RBP5.15□□□□□ -1.58
USF3-202ENST00000478658 CFAP52Q8N1V2 620 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 OR1S2Q8NGQ3 325 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 CASTOR1Q8WTX7 329 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 NDRG1Q92597 394 aaKnown RBP5.15□□□□□ -1.58
USF3-202ENST00000478658 ZNF599Q96NL3 588 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 DIRC2Q96SL1 478 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 JAM3Q9BX67 310 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 ITPAQ9BY32 194 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 PAQR5Q9NXK6 330 aaPredicted RBP5.15□□□□□ -1.58
USF3-202ENST00000478658 URGCP-MRPS24S4R325 110 aa5.15□□□□□ -1.58
USF3-202ENST00000478658 WDR27A2RRH5 827 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 ZNF705GA8MUZ8 300 aaPredicted RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 GAAP10253 952 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 GGT1P19440 569 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 USF1P22415 310 aaPredicted RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 FCER1GP30273 86 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 SLC35A1P78382 337 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 TNK1Q13470 666 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 OR2F1Q13607 317 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 TUSC1Q2TAM9 212 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 COX19Q49B96 90 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 GDPD3Q7L5L3 318 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 DET1Q7L5Y6 550 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 LINC00116Q8NCU8 138 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 RIMS4Q9H426 269 aaPredicted RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 DNMT3BQ9UBC3 853 aaKnown RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 NFS1Q9Y697 457 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 OTOFQ9HC10 1997 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 A8MX80 341 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 CXCR6O00574 342 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 ACOT8O14734 319 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 TCAPO15273 167 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 GPX5O75715 221 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 MGST1P10620 155 aaKnown RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 BTF3P20290 206 aaKnown RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 MAN2A2P49641 1150 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 KCNQ1P51787 676 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 TAS2R60P59551 318 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 SEC61A1P61619 476 aaKnown RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 RPL7AP62424 266 aaKnown RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 GTF2BQ00403 316 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 TROAPQ12815 778 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 ZNF154Q13106 437 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 SELPLGQ14242 412 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 RNF111Q6ZNA4 994 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 SAPCD2Q86UD0 394 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 PRSS58Q8IYP2 241 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 DMBX1Q8NFW5 382 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 LILRB4Q8NHJ6 448 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 ADAMTS19Q8TE59 1207 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 EXOSC8Q96B26 276 aaKnown RBP5.15□□□□□ -1.59
USF3-202ENST00000478658 SGCZQ96LD1 299 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 KCNC2Q96PR1 638 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 SLC6A7Q99884 636 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 KIAA1683Q9H0B3 1180 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 LHX5Q9H2C1 402 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 DPH3P1Q9H4G8 78 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 SLA2Q9H6Q3 261 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 TMEM134Q9H6X4 195 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 ERVK13-1Q9NX77 482 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 IL36AQ9UHA7 158 aa5.15□□□□□ -1.59
USF3-202ENST00000478658 HS3ST3A1Q9Y663 406 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms