RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 CLEC18AA5D8T8 446 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 GMNCA6NCL1 334 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 OR14I1A6ND48 311 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 NPIPB9F8W1W9 429 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 FBP2O00757 339 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 BCKDKO14874 412 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 HCRTR2O43614 444 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 UGT2B17O75795 530 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 CYP7B1O75881 506 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 BCHEP06276 602 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 BMP7P18075 431 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 HK1P19367 917 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 DSCR4P56555 118 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF117Q03924 483 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 CRYZQ08257 329 aaKnown RBP9.32□□□□□ -0.92
HDAC6-222ENST00000478095 NFYCQ13952 458 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 CAPRIN1Q14444 709 aaKnown RBP9.32□□□□□ -0.92
HDAC6-222ENST00000478095 RGNQ15493 299 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 MAPK11Q15759 364 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 MAPK14Q16539 360 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.32□□□□□ -0.92
HDAC6-222ENST00000478095 GXYLT1Q4G148 440 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 RPS26P11Q5JNZ5 115 aaPredicted RBP9.32□□□□□ -0.92
HDAC6-222ENST00000478095 WLSQ5T9L3 541 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 RAET1LQ5VY80 246 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 CBLN3Q6UW01 205 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 CLEC18BQ6UXF7 455 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 DLEU7Q6UYE1 221 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 CPLX4Q7Z7G2 160 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 IFNEQ86WN2 208 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 SNX32Q86XE0 403 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF619Q8N2I2 560 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 C10orf111Q8N326 155 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 CLEC18CQ8NCF0 446 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 MAL2Q969L2 176 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 RELTQ969Z4 430 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 SARAFQ96BY9 339 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 ZG16BQ96DA0 208 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 C1GALT1C1Q96EU7 318 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 SFXN2Q96NB2 322 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 TRNT1Q96Q11 434 aaKnown RBP9.32□□□□□ -0.92
HDAC6-222ENST00000478095 UGT2B28Q9BY64 529 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 NSRP1Q9H0G5 558 aaKnown RBP9.32□□□□□ -0.92
HDAC6-222ENST00000478095 IKZF5Q9H5V7 419 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 RUBCNLQ9H714 662 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 PTGES2Q9H7Z7 377 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 P2RX2Q9UBL9 471 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 VDAC3Q9Y277 283 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 CARD8Q9Y2G2 431 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 DTNAQ9Y4J8 743 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 CAPN7Q9Y6W3 813 aa9.32□□□□□ -0.92
HDAC6-222ENST00000478095 UBR5O95071 2799 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-222ENST00000478095 IGLV3-32A0A0A0MS00 114 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 TRBV5-3A0A0A0MS03 114 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 LOC100653049A0A140TA62 436 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 A0A1B0GUH1 482 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 SERINC4A6NH21 518 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 CLDN24A6NM45 220 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 H3BNH8 94 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 GTPBP1O00178 669 aaKnown RBP9.31□□□□□ -0.92
HDAC6-222ENST00000478095 ZIC3O60481 467 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 SNX3O60493 162 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 ZG16O60844 167 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 BCAS1O75363 584 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-222ENST00000478095 KRT34O76011 436 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 LDLRP01130 860 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 UBL4AP11441 157 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 ESRRAP11474 423 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-222ENST00000478095 GCKP35557 465 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 STARP49675 285 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 CCR4P51679 360 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 MTPNP58546 118 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 TXNL4AP83876 142 aaKnown RBP9.31□□□□□ -0.92
HDAC6-222ENST00000478095 SELPLGQ14242 412 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF141Q15928 474 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF630Q2M218 657 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-222ENST00000478095 REP15Q6BDI9 236 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 VASNQ6EMK4 673 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 MTDHQ86UE4 582 aaKnown RBP9.31□□□□□ -0.92
HDAC6-222ENST00000478095 MISPQ8IVT2 679 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 TMCO5AQ8N6Q1 288 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 POU5F2Q8N7G0 328 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 ZNF511Q8NB15 262 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 B4GALNT2Q8NHY0 566 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 SSC4DQ8WTU2 575 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 ABTB1Q969K4 478 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-222ENST00000478095 CCDC120Q96HB5 630 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 TMEM19Q96HH6 336 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 CGREF1Q99674 301 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 TIMP4Q99727 224 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 NPAS1Q99742 590 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 CPPED1Q9BRF8 314 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-222ENST00000478095 SLC39A3Q9BRY0 314 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 SAP130Q9H0E3 1048 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 SLC38A1Q9H2H9 487 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 TP63Q9H3D4 680 aaPredicted RBP9.31□□□□□ -0.92
HDAC6-222ENST00000478095 POLE3Q9NRF9 147 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 CAMK2AQ9UQM7 478 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 LIPT1Q9Y234 373 aa9.31□□□□□ -0.92
HDAC6-222ENST00000478095 MEMO1Q9Y316 297 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms