RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 GID8Q9NWU2 228 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 CAMK2AQ9UQM7 478 aa16.02■□□□□ 0.15
PTPN7-209ENST00000477554 KLF2Q9Y5W3 355 aaPredicted RBP16.02■□□□□ 0.15
PTPN7-209ENST00000477554 APCP25054 2843 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 H0YC42 278 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 FBP2O00757 339 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 MRASO14807 208 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 T-ENOLP0DO92 83 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 RASSF2P50749 326 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 TPD52P55327 224 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-209ENST00000477554 GFRA1P56159 465 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 ZNHIT3Q15649 155 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-209ENST00000477554 ACSF3Q4G176 576 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-209ENST00000477554 DPP10Q8N608 796 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 TNIP2Q8NFZ5 429 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 OR10Q1Q8NGQ4 319 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 OR14L1PQ8NHC6 308 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 DUSP19Q8WTR2 217 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 RND1Q92730 232 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 GTF2H4Q92759 462 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 ABTB1Q969K4 478 aaPredicted RBP16.01■□□□□ 0.15
PTPN7-209ENST00000477554 MARVELD3Q96A59 401 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 RCN3Q96D15 328 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 ARSGQ96EG1 525 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 CCDC115Q96NT0 180 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 PRDM14Q9GZV8 571 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 RYDENQ9NUL5 291 aaKnown RBP16.01■□□□□ 0.15
PTPN7-209ENST00000477554 GIN1Q9NXP7 522 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 TAS2R10Q9NYW0 307 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 PKDREJQ9NTG1 2253 aa16.01■□□□□ 0.15
PTPN7-209ENST00000477554 FIGNL2A6NMB9 653 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 RFXANKO14593 260 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 AIM2O14862 343 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 OIP5O43482 229 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 CBR3O75828 277 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 KCNH1O95259 989 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 OXSR1O95747 527 aaPredicted RBP16■□□□□ 0.15
PTPN7-209ENST00000477554 AGAP20933 346 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 CPA2P48052 419 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 MXRA7P84157 204 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 SRYQ05066 204 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 SNTB1Q13884 538 aaKnown RBP16■□□□□ 0.15
PTPN7-209ENST00000477554 NHSL2Q5HYW2 709 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 PAGE3Q5JUK9 113 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 C6orf10Q5SRN2 563 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 SLC2A7Q6PXP3 512 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 ARSKQ6UWY0 536 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 YTHDF3Q7Z739 585 aaKnown RBP16■□□□□ 0.15
PTPN7-209ENST00000477554 CA5BP1Q8WTZ4 195 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 ZNF524Q96C55 264 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 ROPN1LQ96C74 230 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 PANX1Q96RD7 426 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 C3orf14Q9HBI5 128 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 NEUROD4Q9HD90 331 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 NDE1Q9NXR1 346 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 PPP4R1LQ9P1A2 415 aa16■□□□□ 0.15
PTPN7-209ENST00000477554 WDR1O75083 606 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 ANP32DO95626 131 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 ANGPTL1O95841 491 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 KRT16P08779 473 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 ALOX5P09917 674 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 DPP4P27487 766 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 SOAT1P35610 550 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 LHX2P50458 406 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 NUDT2P50583 147 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 AGFG1P52594 562 aaKnown RBP15.99■□□□□ 0.15
PTPN7-209ENST00000477554 CLDN15P56746 228 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 NFYCQ13952 458 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 CD226Q15762 336 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 HACD2Q6Y1H2 254 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 RETREG3Q86VR2 466 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 TRIML2Q8N7C3 387 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 GOT1L1Q8NHS2 421 aaPredicted RBP15.99■□□□□ 0.15
PTPN7-209ENST00000477554 TUBA1CQ9BQE3 449 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 C1orf21Q9H246 121 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 DKKL1Q9UK85 242 aa15.99■□□□□ 0.15
PTPN7-209ENST00000477554 NOTCH2Q04721 2471 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 A0A096LPI6 279 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 CENPVL1A0A0U1RR11 272 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 B2RBV5 119 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 CPSF4O95639 269 aaKnown RBP15.98■□□□□ 0.15
PTPN7-209ENST00000477554 SRD5A2P31213 254 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 CDKN2CP42773 168 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 PRR5P85299 388 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 TRMT5Q32P41 509 aaKnown RBP15.98■□□□□ 0.15
PTPN7-209ENST00000477554 NDUFAF6Q330K2 333 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 SPDYE7PQ495Y7 208 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.98■□□□□ 0.15
PTPN7-209ENST00000477554 TMEM211Q6ICI0 200 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 CDC73Q6P1J9 531 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 POMZP3Q6PJE2 187 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 ZNF295-AS1Q8N0V1 137 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 COX18Q8N8Q8 333 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 OR4K17Q8NGC6 315 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 OR4A15Q8NGL6 344 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 LILRB4Q8NHJ6 448 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 OR7D2Q96RA2 312 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 INPP5KQ9BT40 448 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 TACC2O95359 2948 aa15.98■□□□□ 0.15
PTPN7-209ENST00000477554 DOCK7Q96N67 2140 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms