RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	CHI3L2	Q15782	390 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	SBK1	Q52WX2	424 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	FAM120AOS	Q5T036	256 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	OR8G2P	Q6IF36	304 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	AFTPH	Q6ULP2	937 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	KDELC1	Q6UW63	502 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	MOB1B	Q7L9L4	216 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	LRRC70	Q7Z2Q7	622 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	LHFPL4	Q7Z7J7	247 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	OR9A4	Q8NGU2	314 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	TRUB1	Q8WWH5	349 aa	Known RBP	3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	NUS1	Q96E22	293 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	TESK2	Q96S53	571 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	THUMPD2	Q9BTF0	503 aa	Known RBP	3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	RIBC2	Q9H4K1	309 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	ZNF702P	Q9H963	129 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	PDF	Q9HBH1	243 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	RDH8	Q9NYR8	311 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	TMOD2	Q9NZR1	351 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	ANKMY1	Q9P2S6	941 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	PDE10A	Q9Y233	779 aa		3.01	□□□□□ -1.93
RBM39-231	ENST00000477334	ANKRD30B	Q9BXX2	1392 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	WWP2	O00308	870 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	SDHD	O14521	159 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	SERF1A	O75920	110 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	DIRAS3	O95661	229 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	HSPB1	P04792	205 aa	Known RBP	3	□□□□□ -1.93
RBM39-231	ENST00000477334	BCKDHA	P12694	445 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	NCF1	P14598	390 aa	Predicted RBP	3	□□□□□ -1.93
RBM39-231	ENST00000477334	CD1E	P15812	388 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	ATP5A1	P25705	553 aa	Known RBP	3	□□□□□ -1.93
RBM39-231	ENST00000477334	DPP4	P27487	766 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	AXL	P30530	894 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	ADRA1A	P35348	466 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	NAPA	P54920	295 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	VLDLR	P98155	873 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	BCL2L1	Q07817	233 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	RGS1	Q08116	209 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	SCGB2A2	Q13296	93 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	PRR4	Q16378	134 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	DCST2	Q5T1A1	773 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	WSCD1	Q658N2	575 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	LANCL3	Q6ZV70	420 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	PPP1R42	Q7Z4L9	355 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	CBWD2	Q8IUF1	395 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	3	□□□□□ -1.93
RBM39-231	ENST00000477334	GMCL1P1	Q8NEA9	526 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	CNIH3	Q8TBE1	160 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	M1AP	Q8TC57	530 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	THRSP	Q92748	146 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	FAM122A	Q96E09	287 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	SDSL	Q96GA7	329 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	VPS35	Q96QK1	796 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	NMUR2	Q9GZQ4	415 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334		Q9H3A6	140 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	ECT2	Q9H8V3	914 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	COG4	Q9H9E3	785 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	POLD4	Q9HCU8	107 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	AGPAT5	Q9NUQ2	364 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	TMEM9	Q9P0T7	183 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	CRLS1	Q9UJA2	301 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	TNR	Q92752	1358 aa		3	□□□□□ -1.93
RBM39-231	ENST00000477334	DHRS7C	A6NNS2	312 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	GPR89A	B7ZAQ6	455 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334		F8WDY8	70 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	DUX1	O43812	170 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	GPX5	O75715	221 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	OR4F21	O95013	312 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	IGHV3-23	P01764	117 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	GPR89B	P0CG08	455 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	HSPA5	P11021	654 aa	Known RBP	2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	PSMB1	P20618	241 aa	Known RBP	2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	CYP2F1	P24903	491 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	ACAA2	P42765	397 aa	Known RBP	2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	MAGEA5	P43359	124 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	DHPS	P49366	369 aa	Predicted RBP	2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	NTHL1	P78549	312 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	ZNF311	Q5JNZ3	666 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	PVRIG	Q6DKI7	326 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	OR5M10	Q6IEU7	315 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	CXCL17	Q6UXB2	119 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	RGS9BP	Q6ZS82	235 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	TRPM8	Q7Z2W7	1104 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	TMEM110	Q86TL2	294 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	SERPINA9	Q86WD7	417 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	GCNT2	Q8N0V5	402 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	IPMK	Q8NFU5	416 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	FEM1A	Q9BSK4	669 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	FICD	Q9BVA6	458 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	GSDMC	Q9BYG8	508 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	CCSER1	Q9C0I3	900 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	RHOJ	Q9H4E5	214 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	COQ10B	Q9H8M1	238 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	2.99	□□□□□ -1.93	6e-39	■□□□□ 8.5
RBM39-231	ENST00000477334	RNF6	Q9Y252	685 aa		2.99	□□□□□ -1.93
RBM39-231	ENST00000477334	CLRN2	A0PK11	232 aa		2.98	□□□□□ -1.93
RBM39-231	ENST00000477334		H0YCG3	227 aa		2.98	□□□□□ -1.93
RBM39-231	ENST00000477334	CHAD	O15335	359 aa		2.98	□□□□□ -1.93
RBM39-231	ENST00000477334	RIPK2	O43353	540 aa		2.98	□□□□□ -1.93
RBM39-231	ENST00000477334	GMFG	O60234	142 aa		2.98	□□□□□ -1.93

Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms