RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, human

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSMCE4A-208	ENST00000477289	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	OR1N1	Q8NGS0	311 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	OR2T11	Q8NH01	316 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	OR8K3	Q8NH51	312 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	CLHC1	Q8NHS4	586 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	SNRNP27	Q8WVK2	155 aa	Known RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	OR5P2	Q8WZ92	322 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	TSLP	Q969D9	159 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	NCLN	Q969V3	563 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	PPWD1	Q96BP3	646 aa	Known RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	THOC1	Q96FV9	657 aa	Known RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	WBP1	Q96G27	269 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	SENP5	Q96HI0	755 aa	Predicted RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	MAGED4	Q96JG8	741 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	C5orf34	Q96MH7	638 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	OR52E6	Q96RD3	313 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	PANX1	Q96RD7	426 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	GAL3ST4	Q96RP7	486 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	CSF3R	Q99062	836 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	VKORC1	Q9BQB6	163 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	UTP23	Q9BRU9	249 aa	Known RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	C20orf27	Q9GZN8	174 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	CCDC134	Q9H6E4	229 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	TRIM45	Q9H8W5	580 aa	Predicted RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	MMP25	Q9NPA2	562 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	SLCO1B3	Q9NPD5	702 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	ACSS1	Q9NUB1	689 aa	Predicted RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	FGFR1OP2	Q9NVK5	253 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	AIG1	Q9NVV5	245 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	TMEM45A	Q9NWC5	275 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	FAM120C	Q9NX05	1096 aa	Known RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	TEX10	Q9NXF1	929 aa	Predicted RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	TAS2R7	Q9NYW3	318 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	STMN3	Q9NZ72	180 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	ZIM2	Q9NZV7	527 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	BAIAP2L1	Q9UHR4	511 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	ATP6V1H	Q9UI12	483 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	VPS4A	Q9UN37	437 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	FAF1	Q9UNN5	650 aa	Predicted RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	ERVK-11	Q9UQG0	969 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	YARS2	Q9Y2Z4	477 aa	Known RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	OR10H1	Q9Y4A9	318 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	SNX8	Q9Y5X2	465 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	PTGDR2	Q9Y5Y4	395 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	USP34	Q70CQ2	3546 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	SNRNP200	O75643	2136 aa	Known RBP	4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	SDK2	Q58EX2	2172 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	SCN3A	Q9NY46	2000 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	SPTBN2	O15020	2390 aa		4.16	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	COL27A1	Q8IZC6	1860 aa	Predicted RBP	4.15	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	URB1	O60287	2271 aa	Known RBP	4.15	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	DMXL1	Q9Y485	3027 aa		4.15	□□□□□ -1.74
NSMCE4A-208	ENST00000477289	CFAP54	Q96N23	3096 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289		A0A087WV62	115 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	IGKV3D-11	A0A0A0MRZ8	115 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	IGHV3-20	A0A0C4DH32	117 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	PRSS51	A0A1B0GVH4	220 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	FAM234B	A2RU67	622 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	DUXA	A6NLW8	204 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	GABRR3	A8MPY1	467 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289		A8MVJ9	347 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	EVPLL	A8MZ36	301 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	MYO1G	B0I1T2	1018 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	C4orf51	C9J302	202 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	TAF4	O00268	1085 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	RFXANK	O14593	260 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	PGRMC2	O15173	223 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ACOX3	O15254	700 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	EMC8	O43402	210 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CNOT3	O75175	753 aa	Known RBP	4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	KRT75	O95678	551 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	TBX6	O95947	436 aa	Predicted RBP	4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289		P04436	131 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	IFI6	P09912	130 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ALOX5	P09917	674 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	PRR35	P0CG20	571 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	COX6A1	P12074	109 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	HPGD	P15428	266 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ATP6V1C1	P21283	382 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	PPIB	P23284	216 aa	Known RBP	4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	IL12B	P29460	328 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	GCK	P35557	465 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CYB561	P49447	251 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ATP4B	P51164	291 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SLC16A1	P53985	500 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	DIO3	P55073	304 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	NME5	P56597	212 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	SOX8	P57073	446 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	RAE1	P78406	368 aa	Known RBP	4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	POU6F2	P78424	691 aa	Predicted RBP	4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	IGLV3-21	P80748	117 aa	Predicted RBP	4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	TXNL4A	P83876	142 aa	Known RBP	4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	TLE1	Q04724	770 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	ZNF155	Q12901	538 aa	Predicted RBP	4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	CHAF1B	Q13112	559 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	STX5	Q13190	355 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	MFAP5	Q13361	173 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	GNA13	Q14344	377 aa		4.15	□□□□□ -1.75
NSMCE4A-208	ENST00000477289	HLX	Q14774	488 aa	Predicted RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms