RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 EPHX4Q8IUS5 362 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 CBR4Q8N4T8 237 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 PROX1Q92786 737 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 MAGIXQ9H6Y5 334 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 FAIMQ9NVQ4 179 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 CALML5Q9NZT1 146 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 OAZ3Q9UMX2 235 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 PPIEQ9UNP9 301 aaKnown RBP16.65■□□□□ 0.26
ATG4B-217ENST00000475693 TESMINQ9Y4I5 508 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 CNTRLQ7Z7A1 2325 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 GMFGO60234 142 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 RASAL1O95294 804 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 MAGEA2P43356 314 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 SSPNQ14714 243 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 NPTX1Q15818 432 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 ZNF554Q86TJ5 538 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 PEX5LQ8IYB4 626 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 ZNF354BQ96LW1 612 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 P4HTMQ9NXG6 502 aa16.65■□□□□ 0.26
ATG4B-217ENST00000475693 GNGT2O14610 69 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 FFAR1O14842 300 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 ABCB7O75027 752 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 ADAM11O75078 769 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 OR2J2O76002 312 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 LGI1O95970 557 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 LDLRP01130 860 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 ITGAMP11215 1152 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 LIFP15018 202 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 WT1P19544 449 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-217ENST00000475693 DCKP27707 260 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 DCTP40126 519 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 ATP1A4Q13733 1029 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 DECR1Q16698 335 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 MRPL2Q5T653 305 aaKnown RBP16.64■□□□□ 0.25
ATG4B-217ENST00000475693 NDUFAF7Q7L592 441 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 ELP5Q8TE02 316 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 OMA1Q96E52 524 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 KLHDC3Q9BQ90 382 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 TUBA1CQ9BQE3 449 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 CFL2Q9Y281 166 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 ICOSLGO75144 302 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 UGT2B11O75310 529 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 PTNP21246 168 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 FBXW4P57775 412 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 PLCXD2Q0VAA5 305 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 PIN1Q13526 163 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-217ENST00000475693 PRAMEF8Q5VWM4 474 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 PRAMEF7Q5VXH5 474 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 CLVS1Q8IUQ0 354 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-217ENST00000475693 CNOT9Q92600 299 aaKnown RBP16.64■□□□□ 0.25
ATG4B-217ENST00000475693 C12orf43Q96C57 262 aaKnown RBP16.64■□□□□ 0.25
ATG4B-217ENST00000475693 DEFB126Q9BYW3 111 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 GPN2Q9H9Y4 310 aaPredicted RBP16.64■□□□□ 0.25
ATG4B-217ENST00000475693 BAG5Q9UL15 447 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 ZNF451Q9Y4E5 1061 aa16.64■□□□□ 0.25
ATG4B-217ENST00000475693 MED13Q9UHV7 2174 aa16.63■□□□□ 0.25
ATG4B-217ENST00000475693 C2orf72A6NCS6 295 aa16.63■□□□□ 0.25
ATG4B-217ENST00000475693 EEF1A1P68104 462 aaKnown RBP16.63■□□□□ 0.25
ATG4B-217ENST00000475693 OTUD3Q5T2D3 398 aaPredicted RBP16.63■□□□□ 0.25
ATG4B-217ENST00000475693 MRGPREQ86SM8 312 aa16.63■□□□□ 0.25
ATG4B-217ENST00000475693 ZNF786Q8N393 782 aa16.63■□□□□ 0.25
ATG4B-217ENST00000475693 GEMIN6Q8WXD5 167 aaKnown RBP16.63■□□□□ 0.25
ATG4B-217ENST00000475693 PINK1Q9BXM7 581 aa16.63■□□□□ 0.25
ATG4B-217ENST00000475693 GPR87Q9BY21 358 aa16.63■□□□□ 0.25
ATG4B-217ENST00000475693 OR6C76A6NM76 312 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 C21orf140B9A014 251 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 CYP7B1O75881 506 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 UTS2O95399 124 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 IL33O95760 270 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 CYP4B1P13584 511 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 RPS4Y1P22090 263 aaKnown RBP16.62■□□□□ 0.25
ATG4B-217ENST00000475693 RRM2P31350 389 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 B3GNTL1Q67FW5 361 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-217ENST00000475693 SIRT6Q8N6T7 355 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 DIO2Q92813 273 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 ZNF300Q96RE9 604 aaPredicted RBP16.62■□□□□ 0.25
ATG4B-217ENST00000475693 SPATA5L1Q9BVQ7 753 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 MYOTQ9UBF9 498 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 BOD1L1Q8NFC6 3051 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 NPIPB9F8W1W9 429 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 ACOX3O15254 700 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 OIP5O43482 229 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 ZFAND5O76080 213 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 AK1P00568 194 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 IFNW1P05000 195 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 CDH15P55291 814 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 LSM11P83369 360 aaKnown RBP eCLIP16.62■□□□□ 0.251e-6■□□□□ 10
ATG4B-217ENST00000475693 TMED1Q13445 227 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 CD226Q15762 336 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 BICRALQ6AI39 1079 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 G6PC3Q9BUM1 346 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 SCNM1Q9BWG6 230 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 RHBDL2Q9NX52 303 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 NPFFR2Q9Y5X5 522 aa16.62■□□□□ 0.25
ATG4B-217ENST00000475693 TSPAN2O60636 221 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 NADKO95544 446 aaPredicted RBP16.61■□□□□ 0.25
ATG4B-217ENST00000475693 IL12BP29460 328 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 CDH12P55289 794 aa16.61■□□□□ 0.25
ATG4B-217ENST00000475693 ELOAQ14241 798 aaKnown RBP16.61■□□□□ 0.25
ATG4B-217ENST00000475693 LARS2Q15031 903 aaKnown RBP16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms