RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MEX3AA1L020 520 aaKnown RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 NPIPA7E9PJI5 369 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 STX7O15400 261 aaKnown RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 ERLIN2O94905 339 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 HBQ1P09105 142 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 NPIPA8P0DM63 369 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 PVRP15151 417 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 PGCP20142 388 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 NT5EP21589 574 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 NF2P35240 595 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 RPL4P36578 427 aaKnown RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 MAGEA5P43359 124 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 MAGEA8P43361 318 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 BRCC3P46736 316 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 AP3M2P53677 418 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 PLA2G16P53816 162 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 RPS6P62753 249 aaKnown RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 CNTN2Q02246 1040 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 RGS1Q08116 209 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 FGL1Q08830 312 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 SIX1Q15475 284 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 SNAI3Q3KNW1 292 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 MAJINQ3KP22 176 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 C14orf28Q4W4Y0 310 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 LGSNQ5TDP6 509 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 ADAM5Q6NVV9 412 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 ZNF613Q6PF04 617 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 APTXQ7Z2E3 356 aaKnown RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 EFL1Q7Z2Z2 1120 aaKnown RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 PARGQ86W56 976 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 PLA2G4DQ86XP0 818 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 CCDC50Q8IVM0 306 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 UBQLNLQ8IYU4 475 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 C4orf32Q8N8J7 132 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 ZNRF1Q8ND25 227 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 BHLHE23Q8NDY6 225 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 PRSS33Q8NF86 280 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 OR10A7Q8NGE5 316 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 OR2T3Q8NH03 318 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 CCDC26Q8TAB7 109 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 RFESDQ8TAC1 157 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 EMG1Q92979 244 aaKnown RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 DNAJA3Q96EY1 480 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 SH3YL1Q96HL8 342 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 ZNF597Q96LX8 424 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 TTYH2Q9BSA4 534 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 SYT11Q9BT88 431 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 RPP25Q9BUL9 199 aaKnown RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 GCOM2Q9BZD3 368 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 POLR3FQ9H1D9 316 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 GPN2Q9H9Y4 310 aaPredicted RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 ELOVL3Q9HB03 270 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 EXOSC3Q9NQT5 275 aaKnown RBP3.47□□□□□ -1.85
BRCA1-212ENST00000473961 ELOVL2Q9NXB9 296 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 DCAF16Q9NXF7 216 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 GNG12Q9UBI6 72 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 CHRNA9Q9UGM1 479 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 MLXQ9UH92 298 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 NPIPA1Q9UND3 350 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 NTNG1Q9Y2I2 539 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 ATP6V1DQ9Y5K8 247 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 KDM5DQ9BY66 1539 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 ATP10AO60312 1499 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 SNAPC4Q5SXM2 1469 aa3.47□□□□□ -1.85
BRCA1-212ENST00000473961 CFAP74Q9C0B2 1584 aa3.46□□□□□ -1.85
BRCA1-212ENST00000473961 ARHGEF11O15085 1522 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 EHBP1L1Q8N3D4 1523 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 UGGT2Q9NYU1 1516 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 KDM6BO15054 1643 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 FAM240BA0A1B0GVZ2 78 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 OR6C65A6NJZ3 312 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 FAM74A7A6NL05 159 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-212ENST00000473961 SOCS3O14543 225 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 ZNF208O43345 1280 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 LCMT2O60294 686 aaKnown RBP3.46□□□□□ -1.86
BRCA1-212ENST00000473961 JCHAINP01591 159 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 H2BFMP0C1H6 154 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 DPEP1P16444 411 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 PAX7P23759 505 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 ATP4BP51164 291 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 CRIP2P52943 208 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-212ENST00000473961 AIF1P55008 147 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 OTUD4Q01804 1114 aaKnown RBP3.46□□□□□ -1.86
BRCA1-212ENST00000473961 PLOD1Q02809 727 aaPredicted RBP3.46□□□□□ -1.86
BRCA1-212ENST00000473961 RIPPLY1Q0D2K3 151 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 DDX39BQ13838 428 aaKnown RBP3.46□□□□□ -1.86
BRCA1-212ENST00000473961 LY6DQ14210 128 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 SYPL1Q16563 259 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 CAMK4Q16566 473 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 MICAQ29983 383 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 FAM74A3Q4VXF1 159 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 BOLA3Q53S33 107 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 MS4A13Q5J8X5 152 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 DOK6Q6PKX4 331 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 METTL7BQ6UX53 244 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 ADAMTSL5Q6ZMM2 481 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 LANCL3Q6ZV70 420 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 TAS2R42Q7RTR8 314 aa3.46□□□□□ -1.86
BRCA1-212ENST00000473961 NANOGNBQ7Z5D8 188 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms