RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 GCKP35557 465 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 KHKP50053 298 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 ATP12AP54707 1039 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 ZNF117Q03924 483 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 SRYQ05066 204 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 LRRC74AQ0VAA2 488 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 TMEM44Q2T9K0 475 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 NDUFAF6Q330K2 333 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 COX20Q5RI15 118 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 AAGABQ6PD74 315 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 ENPP6Q6UWR7 440 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 PLXDC2Q6UX71 529 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 NAXEQ8NCW5 288 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 OR10Q1Q8NGQ4 319 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 CA5BP1Q8WTZ4 195 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 XAGE5Q8WWM1 108 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 TRIB1Q96RU8 372 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 UCK2Q9BZX2 261 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 DCTN4Q9UJW0 460 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 MKLN1Q9UL63 735 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 VDAC3Q9Y277 283 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 CELSR2Q9HCU4 2923 aa17.13■□□□□ 0.33
PTCD3-210ENST00000473829 DOCK7Q96N67 2140 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 H0Y3Z8 333 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 HMGN4O00479 90 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 AK1P00568 194 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 MVDP53602 400 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 STX1BP61266 288 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 RCAN2Q14206 197 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 GPR68Q15743 365 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 PDZK1Q5T2W1 519 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 RIPPLY2Q5TAB7 128 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 NSUN5P2Q63ZY6 315 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 SLC2A7Q6PXP3 512 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 CBLN3Q6UW01 205 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 MSANTD1Q6ZTZ1 278 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 C16orf62Q7Z3J2 963 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 LIX1LQ8IVB5 337 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 MISPQ8IVT2 679 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 TRIML2Q8N7C3 387 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 ZNF614Q8N883 585 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 ZNF527Q8NB42 609 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 TNIP2Q8NFZ5 429 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 PHOSPHO1Q8TCT1 267 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 ZFP90Q8TF47 636 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 ASB5Q8WWX0 329 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 HOXD1Q9GZZ0 328 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 ZNF337Q9Y3M9 751 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 HCFC1P51610 2035 aa17.12■□□□□ 0.33
PTCD3-210ENST00000473829 NKX2-6A6NCS4 301 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 H0YC42 278 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 HCRTR2O43614 444 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 KIAA0513O60268 411 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 STX11O75558 287 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 UGT2B17O75795 530 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 TPD52P55327 224 aaPredicted RBP17.11■□□□□ 0.33
PTCD3-210ENST00000473829 CLDN15P56746 228 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 MAPK14Q16539 360 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 PLPPR5Q32ZL2 321 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 SP5Q6BEB4 398 aaPredicted RBP17.11■□□□□ 0.33
PTCD3-210ENST00000473829 TYW3Q6IPR3 259 aaKnown RBP17.11■□□□□ 0.33
PTCD3-210ENST00000473829 FRRS1Q6ZNA5 592 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 ADGRE4PQ86SQ3 457 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 LACC1Q8IV20 430 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 LILRB4Q8NHJ6 448 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 B4GALNT2Q8NHY0 566 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 ZPLD1Q8TCW7 415 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 STON2Q8WXE9 905 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 GTF2H4Q92759 462 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 ROPN1LQ96C74 230 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 AURKBQ96GD4 344 aaPredicted RBP17.11■□□□□ 0.33
PTCD3-210ENST00000473829 ITCHQ96J02 903 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 NMUR2Q9GZQ4 415 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 RMND5AQ9H871 391 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 SLC52A3Q9NQ40 469 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 MED17Q9NVC6 651 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 EXD2Q9NVH0 621 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 CCDC167Q9P0B6 97 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 CARD8Q9Y2G2 431 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 DTNAQ9Y4J8 743 aa17.11■□□□□ 0.33
PTCD3-210ENST00000473829 CD8B2A6NJW9 211 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 H3BML4 177 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 NR5A2O00482 541 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 AGR2O95994 175 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 ZCCHC18P0CG32 403 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 HOXB9P17482 250 aaPredicted RBP17.1■□□□□ 0.33
PTCD3-210ENST00000473829 POU3F2P20265 443 aaPredicted RBP17.1■□□□□ 0.33
PTCD3-210ENST00000473829 CAPN3P20807 821 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 MSX1P28360 303 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 CEACAM8P31997 349 aaPredicted RBP17.1■□□□□ 0.33
PTCD3-210ENST00000473829 ATP4BP51164 291 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 SUCLG1P53597 346 aaKnown RBP17.1■□□□□ 0.33
PTCD3-210ENST00000473829 TFF3Q07654 80 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 ZNF141Q15928 474 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 GLYR1Q49A26 553 aaPredicted RBP17.1■□□□□ 0.33
PTCD3-210ENST00000473829 ATAD3BQ5T9A4 648 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 CGB2Q6NT52 195 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 BLOC1S3Q6QNY0 202 aa17.1■□□□□ 0.33
PTCD3-210ENST00000473829 MTERF4Q7Z6M4 381 aaKnown RBP17.1■□□□□ 0.33
PTCD3-210ENST00000473829 HMGN2P46Q86SG4 172 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms