RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 CSF2P04141 144 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 IGFBP1P08833 259 aaPredicted RBP4.82□□□□□ -1.64
SEC22A-204ENST00000473494 PPIAL4GP0DN37 164 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 DLSTP36957 453 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 ARHGDIBP52566 201 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 CRMP1Q14194 572 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 PPP1R3AQ16821 1122 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 SLC36A3Q495N2 470 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 TCTEX1D4Q5JR98 221 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 SLX4IPQ5VYV7 408 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 STAC2Q6ZMT1 411 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 ZNF600Q6ZNG1 722 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 HSD11B1LQ7Z5J1 315 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 IPMKQ8NFU5 416 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 FAM222BQ8WU58 562 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 TADA1Q96BN2 335 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 ZBED6CLQ96FA7 236 aaPredicted RBP4.82□□□□□ -1.64
SEC22A-204ENST00000473494 AKR1E2Q96JD6 320 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 RAB33BQ9H082 229 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 EXOSC3Q9NQT5 275 aaKnown RBP4.82□□□□□ -1.64
SEC22A-204ENST00000473494 RBM28Q9NW13 759 aaKnown RBP4.82□□□□□ -1.64
SEC22A-204ENST00000473494 IMPAD1Q9NX62 359 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 DHRS4-AS1Q9P1J3 65 aa4.82□□□□□ -1.64
SEC22A-204ENST00000473494 COL5A2P05997 1499 aaPredicted RBP4.81□□□□□ -1.64
SEC22A-204ENST00000473494 TRAV9-2A0A087WT02 112 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 ZNF354AO60765 605 aaPredicted RBP4.81□□□□□ -1.64
SEC22A-204ENST00000473494 STX11O75558 287 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 DRD5P21918 477 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 PSMA2P25787 234 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 ALDH3B2P48448 385 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 SLC8A3P57103 927 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 PLOD1Q02809 727 aaPredicted RBP4.81□□□□□ -1.64
SEC22A-204ENST00000473494 COX10Q12887 443 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 HIGD2BQ4VC39 106 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 NCR3LG1Q68D85 454 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 SERINC5Q86VE9 423 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 HIPK1Q86Z02 1210 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 OR2T34Q8NGX1 318 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 OR2L2Q8NH16 312 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 TMEM121Q9BTD3 319 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 HCAR1Q9BXC0 346 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 OPN3Q9H1Y3 402 aaPredicted RBP4.81□□□□□ -1.64
SEC22A-204ENST00000473494 TIGARQ9NQ88 270 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 ELOVL2Q9NXB9 296 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 EHFQ9NZC4 300 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 TRPM2O94759 1503 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 CPS1P31327 1500 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 NEXMIFQ5QGS0 1516 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 KIF1BO60333 1816 aa4.81□□□□□ -1.64
SEC22A-204ENST00000473494 SETD1AO15047 1707 aaKnown RBP4.8□□□□□ -1.64
SEC22A-204ENST00000473494 RAB3GAP2Q9H2M9 1393 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 PLEKHG1Q9ULL1 1385 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 NWD1Q149M9 1564 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 PPIAL4DF5H284 164 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 SLC17A2O00624 439 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 CASKO14936 926 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 LCMT2O60294 686 aaKnown RBP4.8□□□□□ -1.64
SEC22A-204ENST00000473494 TBX19O60806 448 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 UFL1O94874 794 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 PRAMEF12O95522 483 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 MBD3O95983 291 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 PIGRP01833 764 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 ACADSP16219 412 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 XRCC1P18887 633 aaPredicted RBP4.8□□□□□ -1.64
SEC22A-204ENST00000473494 HNRNPA2B1P22626 353 aaKnown RBP4.8□□□□□ -1.64
SEC22A-204ENST00000473494 RPL4P36578 427 aaKnown RBP4.8□□□□□ -1.64
SEC22A-204ENST00000473494 RPL34P49207 117 aaKnown RBP4.8□□□□□ -1.64
SEC22A-204ENST00000473494 HMGCS2P54868 508 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 CCDC57Q2TAC2 916 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 CELF3Q5SZQ8 465 aaKnown RBP4.8□□□□□ -1.64
SEC22A-204ENST00000473494 DCST2Q5T1A1 773 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 GCNT7Q6ZNI0 430 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 MYPOPQ86VE0 399 aaPredicted RBP4.8□□□□□ -1.64
SEC22A-204ENST00000473494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.8□□□□□ -1.64
SEC22A-204ENST00000473494 VN1R17PQ8TDU5 208 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 OSTF1Q92882 214 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 RANBP9Q96S59 729 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 NFKBIZQ9BYH8 718 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 UBXN6Q9BZV1 441 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 DHX33Q9H6R0 707 aaKnown RBP4.8□□□□□ -1.64
SEC22A-204ENST00000473494 PRODH2Q9UF12 536 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 XPO7Q9UIA9 1087 aaKnown RBP4.8□□□□□ -1.64
SEC22A-204ENST00000473494 ANAPC7Q9UJX3 599 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 DUSP12Q9UNI6 340 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 PPLO60437 1756 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 IQSEC2Q5JU85 1478 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 SETD5Q9C0A6 1442 aa4.8□□□□□ -1.64
SEC22A-204ENST00000473494 TMEM94Q12767 1356 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 ZSCAN5BA6NJL1 495 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 GJB5O95377 273 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 H2AFZP0C0S5 128 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 GATA2P23769 480 aaPredicted RBP4.79□□□□□ -1.64
SEC22A-204ENST00000473494 HMGCLP35914 325 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 SNTB2Q13425 540 aaKnown RBP4.79□□□□□ -1.64
SEC22A-204ENST00000473494 IL18R1Q13478 541 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 SLC10A1Q14973 349 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 ATXN7L3Q14CW9 347 aaPredicted RBP4.79□□□□□ -1.64
SEC22A-204ENST00000473494 CHI3L2Q15782 390 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 USH1GQ495M9 461 aa4.79□□□□□ -1.64
SEC22A-204ENST00000473494 NADK2Q4G0N4 442 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms