RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 HINT2Q9BX68 163 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 C1QTNF3Q9BXJ4 246 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 CLSTN2Q9H4D0 955 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 HAUS4Q9H6D7 363 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 MARCH7Q9H992 704 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 NEK6Q9HC98 313 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 FZD3Q9NPG1 666 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 TUBA8Q9NY65 449 aaPredicted RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 NPIPA1Q9UND3 350 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 STK38LQ9Y2H1 464 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 COMMD3-BMI1R4GMX3 469 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 RGPD2P0DJD1 1756 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 COL2A1P02458 1487 aaPredicted RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 ZNF609O15014 1411 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 RIC1Q4ADV7 1423 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 ZNF804BA4D1E1 1349 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 USP42Q9H9J4 1324 aaKnown RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 CENPJQ9HC77 1338 aaPredicted RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 SMCO2A6NFE2 343 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 PRR32B1ATL7 298 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 H0Y8G0 127 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 RNASEH1O60930 286 aaKnown RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 KRT36O76013 467 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 ECDO95905 644 aaPredicted RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 GCFC2P16383 781 aaKnown RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 CEBPBP17676 345 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 CTNNA2P26232 953 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 MARK3P27448 753 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 CDH6P55285 790 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 PPIL2Q13356 520 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 UBE2V2Q15819 145 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 STK11Q15831 433 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 FBXO48Q5FWF7 155 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 WSCD1Q658N2 575 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 NADSYN1Q6IA69 706 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 KIRREL3Q8IZU9 778 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 GPC2Q8N158 579 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 FAM83FQ8NEG4 500 aaPredicted RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 OR4D5Q8NGN0 318 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 OR1F12Q8NHA8 337 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 SLCO2A1Q92959 643 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 C10orf35Q96D05 121 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 AKR1E2Q96JD6 320 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 ZNF48Q96MX3 618 aaPredicted RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 CCT8L2Q96SF2 557 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 GLIPR2Q9H4G4 154 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 MEPEQ9NQ76 525 aaPredicted RBP2.3□□□□□ -2.04
XRN1-210ENST00000472697 MED17Q9NVC6 651 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 TEKT2Q9UIF3 430 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 GRID1Q9ULK0 1009 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 ERVK-19Q9WJR5 959 aa2.3□□□□□ -2.04
XRN1-210ENST00000472697 KIF20BQ96Q89 1820 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 LAMB2P55268 1798 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 IGLV5-39A0A0G2JS06 123 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 OR5H15A6NDH6 313 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 B8ZZF3 427 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 H3BMQ9 156 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 NDUFS8O00217 210 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 KCNJ13O60928 360 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 PDE9AO76083 593 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 TOXO94900 526 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 BRI3O95415 125 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 S100A9P06702 114 aaKnown RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 WNT2P09544 360 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 MAKP20794 623 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 FEN1P39748 380 aaKnown RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 GPR4P46093 362 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 OR3A2P47893 321 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 RASSF2P50749 326 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 NAPAP54920 295 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 RPS14P62263 151 aaKnown RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 RPS15P62841 145 aaKnown RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 MFGE8Q08431 387 aaPredicted RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 XRCC4Q13426 336 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 P2RY6Q15077 328 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 KNOP1Q1ED39 458 aaKnown RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 CTSL3PQ5NE16 218 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 FAM120AOSQ5T036 256 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 C1orf220Q5T0J3 134 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 WLSQ5T9L3 541 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 HIST2H2AA3Q6FI13 130 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 TMEM53Q6P2H8 277 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 Q6ZVQ6 151 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 G2E3Q7L622 706 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 PIGZQ86VD9 579 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 LACC1Q8IV20 430 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 TMEM99Q8N816 258 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 MLKLQ8NB16 471 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 C11orf45Q8TAV5 145 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 CD300LFQ8TDQ1 290 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 TBCKQ8TEA7 893 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 GIPC3Q8TF64 312 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 BADQ92934 168 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 RTP4Q96DX8 246 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 MTBPQ96DY7 904 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 GPA33Q99795 319 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 DPH7Q9BTV6 452 aa2.29□□□□□ -2.04
XRN1-210ENST00000472697 MRPL37Q9BZE1 423 aaKnown RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 NXF5Q9H1B4 397 aaKnown RBP2.29□□□□□ -2.04
XRN1-210ENST00000472697 POLR3FQ9H1D9 316 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms