RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 DUXAA6NLW8 204 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 HMGN4O00479 90 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 CLDN1O95832 211 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 BMP7P18075 431 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 STX1BP61266 288 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 IRX1P78414 480 aaPredicted RBP11.23□□□□□ -0.61
LINC00888-202ENST00000471496 C17orf67Q0P5P2 114 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 SQLEQ14534 574 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 TOMM20Q15388 145 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 CDSNQ15517 529 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 RNF130Q86XS8 419 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 GATSQ8NAP1 163 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 PHF10Q8WUB8 498 aaKnown RBP11.23□□□□□ -0.61
LINC00888-202ENST00000471496 UGT2B28Q9BY64 529 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 ZNF350Q9GZX5 532 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 TP63Q9H3D4 680 aaPredicted RBP11.23□□□□□ -0.61
LINC00888-202ENST00000471496 EXO5Q9H790 373 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 SDHAF3Q9NRP4 125 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 TMEM45AQ9NWC5 275 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 PCDHGB3Q9Y5G1 929 aa11.23□□□□□ -0.61
LINC00888-202ENST00000471496 CACNA1CQ13936 2221 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 C15orf38-AP3S2A0A0A6YYH1 394 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 OIP5O43482 229 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 NDUFB5O43674 189 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 GUSBP08236 651 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 DPP4P27487 766 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 CHI3L1P36222 383 aaPredicted RBP11.22□□□□□ -0.61
LINC00888-202ENST00000471496 DCTP40126 519 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 ATP12AP54707 1039 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 DSCR4P56555 118 aaPredicted RBP11.22□□□□□ -0.61
LINC00888-202ENST00000471496 PER3P56645 1201 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 MAPK11Q15759 364 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 AGKQ53H12 422 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 PAGE3Q5JUK9 113 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 MSRB3Q8IXL7 192 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 TRIML2Q8N7C3 387 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 OR4K17Q8NGC6 315 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 OR14L1PQ8NHC6 308 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 PNPT1Q8TCS8 783 aaKnown RBP11.22□□□□□ -0.61
LINC00888-202ENST00000471496 XAGE5Q8WWM1 108 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 SPDL1Q96EA4 605 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 C1GALT1C1Q96EU7 318 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 AURKBQ96GD4 344 aaPredicted RBP11.22□□□□□ -0.61
LINC00888-202ENST00000471496 ITCHQ96J02 903 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 TMEM120AQ9BXJ8 343 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 PRDM14Q9GZV8 571 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 SAP130Q9H0E3 1048 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 RUBCNLQ9H714 662 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 TAS2R10Q9NYW0 307 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 SLC25A37Q9NYZ2 338 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 SLAMF8Q9P0V8 285 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 ACAD8Q9UKU7 415 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 PCDHB14Q9Y5E9 798 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 ADGRG4Q8IZF6 3080 aa11.22□□□□□ -0.61
LINC00888-202ENST00000471496 DOCK7Q96N67 2140 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 TRBV5-3A0A0A0MS03 114 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 KDM4EB2RXH2 506 aaPredicted RBP11.21□□□□□ -0.61
LINC00888-202ENST00000471496 NR5A2O00482 541 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 STX11O75558 287 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 AK1P00568 194 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 THBS1P07996 1170 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 VIMP08670 466 aaKnown RBP11.21□□□□□ -0.61
LINC00888-202ENST00000471496 NCF2P19878 526 aaPredicted RBP11.21□□□□□ -0.61
LINC00888-202ENST00000471496 ATP6V1C1P21283 382 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 ACVR2AP27037 513 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 CLK3P49761 638 aaKnown RBP11.21□□□□□ -0.61
LINC00888-202ENST00000471496 KHKP50053 298 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 SF3A3Q12874 501 aaKnown RBP eCLIP11.21□□□□□ -0.61
LINC00888-202ENST00000471496 ZNF141Q15928 474 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 MAPK14Q16539 360 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 TMEM44Q2T9K0 475 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 FLYWCH1Q4VC44 716 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 LRIF1Q5T3J3 769 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 WLSQ5T9L3 541 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 METTL21CQ5VZV1 264 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 TYW3Q6IPR3 259 aaKnown RBP11.21□□□□□ -0.61
LINC00888-202ENST00000471496 ZNF585AQ6P3V2 769 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 ARSKQ6UWY0 536 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 FRRS1Q6ZNA5 592 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 SEM1Q6ZVN7 128 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 ULK2Q8IYT8 1036 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 ABTB1Q969K4 478 aaPredicted RBP11.21□□□□□ -0.61
LINC00888-202ENST00000471496 ZNF524Q96C55 264 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 ROPN1LQ96C74 230 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 ZG16BQ96DA0 208 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 WDYHV1Q96HA8 205 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 NPAS1Q99742 590 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 NMUR2Q9GZQ4 415 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 HOXD1Q9GZZ0 328 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 RMND5AQ9H871 391 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 TPT1P8Q9HAU6 139 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 EXD2Q9NVH0 621 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 MKLN1Q9UL63 735 aa11.21□□□□□ -0.61
LINC00888-202ENST00000471496 CELSR2Q9HCU4 2923 aa11.21□□□□□ -0.62
LINC00888-202ENST00000471496 A0A096LPI6 279 aa11.2□□□□□ -0.62
LINC00888-202ENST00000471496 TMEM229AB2RXF0 380 aa11.2□□□□□ -0.62
LINC00888-202ENST00000471496 SCDO00767 359 aa11.2□□□□□ -0.62
LINC00888-202ENST00000471496 KIAA0513O60268 411 aa11.2□□□□□ -0.62
LINC00888-202ENST00000471496 WDR1O75083 606 aa11.2□□□□□ -0.62
LINC00888-202ENST00000471496 TNFRSF21O75509 655 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms