RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 FAM213BQ8TBF2 198 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 CD244Q9BZW8 370 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 NMES1Q9C002 83 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 KCNK12Q9HB15 430 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 ARNT2Q9HBZ2 717 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SAGE1Q9NXZ1 904 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 TRAPPC2LQ9UL33 140 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 SSUH2Q9Y2M2 353 aa6.53□□□□□ -1.36
BRCA1-210ENST00000471181 H3BMQ9 156 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 ADAM12O43184 909 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 DNAJB6O75190 326 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 OPN1LWP04000 364 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 CHRM4P08173 479 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 GSTP1P09211 210 aaKnown RBP6.52□□□□□ -1.36
BRCA1-210ENST00000471181 IL32P24001 234 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 GDF1P27539 372 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 HADHBP55084 474 aaKnown RBP6.52□□□□□ -1.36
BRCA1-210ENST00000471181 IL13RA1P78552 427 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 GRM7Q14831 915 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 PDZD11Q5EBL8 140 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 AVPI1Q5T686 147 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 DRICH1Q6PGQ1 229 aaPredicted RBP6.52□□□□□ -1.36
BRCA1-210ENST00000471181 RBMS3Q6XE24 437 aaKnown RBP6.52□□□□□ -1.36
BRCA1-210ENST00000471181 OR6T1Q8NGN1 323 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 OR5P2Q8WZ92 322 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 NT5C3BQ969T7 300 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 ZBTB8AQ96BR9 441 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 SCLYQ96I15 445 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 TEPSINQ96N21 525 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 SEMA4CQ9C0C4 833 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 GPR88Q9GZN0 384 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 OR52A5Q9H2C5 316 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 OR6C2Q9NZP2 312 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 KCMF1Q9P0J7 381 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 STEAP1Q9UHE8 339 aa6.52□□□□□ -1.36
BRCA1-210ENST00000471181 LTBP4Q8N2S1 1624 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 CNTNAP4Q9C0A0 1308 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 A0A0B4J2A0 478 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 PRSS51A0A1B0GVH4 220 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 MYBPHLA2RUH7 354 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 TIMM8AO60220 97 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 CIDEAO60543 219 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 UGDHO60701 494 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 CLDN1O95832 211 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ARSBP15848 533 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 RPA2P15927 270 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 CD6P30203 668 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 LPAL2Q16609 132 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ANKRD13BQ86YJ7 626 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SCML4Q8N228 414 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 IL31RAQ8NI17 732 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 FUBP3Q96I24 572 aaKnown RBP eCLIP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF845Q96IR2 970 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 FOXN4Q96NZ1 517 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SSU72Q9NP77 194 aaKnown RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SLC35D1Q9NTN3 355 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ZDHHC7Q9NXF8 308 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 P4HTMQ9NXG6 502 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 GPR83Q9NYM4 423 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 EHFQ9NZC4 300 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SHPKQ9UHJ6 478 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 NUBP2Q9Y5Y2 271 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 BTBD17A6NE02 478 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 F6UZH7 168 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SLC16A5O15375 505 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 LYRM1O43325 122 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 LAMTOR5O43504 91 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SDC3O75056 442 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 RFPL3O75679 317 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 OR8U8P0C7N1 319 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 EBLN1P0CF75 366 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 HLA-DMAP28067 261 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 TRHRP34981 398 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-210ENST00000471181 FOLR3P41439 243 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 RAB11AP62491 216 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SFT2D3Q587I9 215 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 MFSD5Q6N075 450 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ZNF852Q6ZMS4 543 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 DPPA2Q7Z7J5 298 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 FAM109AQ8N4B1 249 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 PLPP5Q8NEB5 264 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 PSMF1Q92530 271 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 HLA-CQ95604 372 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 KREMEN1Q96MU8 473 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 MUS81Q96NY9 551 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SGPP1Q9BX95 441 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 GPR174Q9BXC1 333 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 IL25Q9H293 177 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 SLC39A9Q9NUM3 307 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 COPS3Q9UNS2 423 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 LRRC7Q96NW7 1537 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 NTF3P20783 257 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 CPOXP36551 454 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 ACVRL1P37023 503 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 DAOAP59103 153 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 RBPJQ06330 500 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 NOGQ13253 232 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 BTN1A1Q13410 526 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 CRMP1Q14194 572 aa6.52□□□□□ -1.37
BRCA1-210ENST00000471181 OR7A5Q15622 319 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms