RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 NCLNQ969V3 563 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 VSTM2LQ96N03 204 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 LMF1Q96S06 567 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 LPAR4Q99677 370 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 HOPXQ9BPY8 73 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-208ENST00000470268 THUMPD3Q9BV44 507 aaKnown RBP4.36□□□□□ -1.71
SF3B1-208ENST00000470268 RSPO3Q9BXY4 272 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ITPAQ9BY32 194 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 SEMA4CQ9C0C4 833 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ZNF700Q9H0M5 742 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 MMADHCQ9H3L0 296 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-208ENST00000470268 EQTNQ9NQ60 294 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 GID8Q9NWU2 228 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 P4HTMQ9NXG6 502 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ADA2Q9NZK5 511 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 PTGFRNQ9P2B2 879 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-208ENST00000470268 CD300AQ9UGN4 299 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 KCND3Q9UK17 655 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 PADI2Q9Y2J8 665 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 SCN2AQ99250 2005 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 NUP210LQ5VU65 1888 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 AHCTF1Q8WYP5 2266 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 A0A0A6YYJ9 748 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 HMGN4O00479 90 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 CIB2O75838 187 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 CD63P08962 238 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 IFI6P09912 130 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 OR12D1P0DN82 309 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ACP2P11117 423 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ANPEPP15144 967 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 BMP7P18075 431 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 MATN1P21941 496 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 CHI3L1P36222 383 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-208ENST00000470268 CRATP43155 626 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 GSK3BP49841 420 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 IL13RA1P78552 427 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 MRPS22P82650 360 aaKnown RBP4.36□□□□□ -1.71
SF3B1-208ENST00000470268 LIPEQ05469 1076 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ATP1A4Q13733 1029 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ODF1Q14990 250 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 EBPQ15125 230 aaKnown RBP4.36□□□□□ -1.71
SF3B1-208ENST00000470268 NNATQ16517 81 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 DUSP5Q16690 384 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 SPDYE7PQ495Y7 208 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 C16orf89Q6UX73 402 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ISLR2Q6UXK2 745 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 GALNT10Q86SR1 603 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 IFNEQ86WN2 208 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 TRIML2Q8N7C3 387 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 MORN4Q8NDC4 146 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 OR56A1Q8NGH5 318 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 OR52N2Q8NGI0 321 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 MIPOL1Q8TD10 442 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 SFXN5Q8TD22 340 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ELP5Q8TE02 316 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 PIK3R3Q92569 461 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ITFG2Q969R8 447 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ADIPOR1Q96A54 375 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 NACC2Q96BF6 587 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 SLC35A4Q96G79 324 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 MS4A4EQ96PG1 132 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 PELOQ9BRX2 385 aaKnown RBP4.36□□□□□ -1.71
SF3B1-208ENST00000470268 OR51I1Q9H343 314 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 FOLH1BQ9HBA9 442 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 C3orf14Q9HBI5 128 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 ZNF160Q9HCG1 818 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 S100A14Q9HCY8 104 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 SPAG4Q9NPE6 437 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 FBXO34Q9NWN3 711 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 C19orf25Q9UFG5 118 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-208ENST00000470268 BCAP29Q9UHQ4 241 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 FBXL4Q9UKA2 621 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 C15orf41Q9Y2V0 281 aa4.36□□□□□ -1.71
SF3B1-208ENST00000470268 HEMK1Q9Y5R4 338 aaPredicted RBP4.36□□□□□ -1.71
SF3B1-208ENST00000470268 NSG1A0A0A6YYJ2 146 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 GXYLT2A0PJZ3 443 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 TAF4O00268 1085 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 ACOT8O14734 319 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 KLK10O43240 276 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 FCMRO60667 390 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 PRAMEF2O60811 474 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 GCM2O75603 506 aaPredicted RBP4.35□□□□□ -1.71
SF3B1-208ENST00000470268 CYP7B1O75881 506 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 KRT75O95678 551 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 IGKV1D-16P01601 117 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 IGHEP01854 428 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 PRKAR1AP10644 381 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 ITGAMP11215 1152 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 PAX7P23759 505 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 PEX2P28328 305 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 EIF2S3P41091 472 aaKnown RBP4.35□□□□□ -1.71
SF3B1-208ENST00000470268 CRYBA2P53672 197 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 SRSF2Q01130 221 aaKnown RBP4.35□□□□□ -1.71
SF3B1-208ENST00000470268 SLC34A1Q06495 639 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 CHAF1BQ13112 559 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 SYPL1Q16563 259 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 BTBD16Q32M84 506 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 TOR2AQ5JU69 321 aa4.35□□□□□ -1.71
SF3B1-208ENST00000470268 CCNJQ5T5M9 372 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms