RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 SHARPINQ9H0F6 387 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 SEMA6AQ9H2E6 1030 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 METTL7AQ9H8H3 244 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 AKTIPQ9H8T0 292 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 ACTR8Q9H981 624 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 BARX1Q9HBU1 254 aaPredicted RBP8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 MID1IP1Q9NPA3 183 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 GID8Q9NWU2 228 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 TEX10Q9NXF1 929 aaPredicted RBP8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 MS4A12Q9NXJ0 267 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 PTTG2Q9NZH5 202 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 CLCF1Q9UBD9 225 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 CD300AQ9UGN4 299 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 RNF112Q9ULX5 631 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 DLGAP4Q9Y2H0 992 aa8.05□□□□□ -1.12
SYNGAP1-205ENST00000470232 ROS1P08922 2347 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 PRORSD1PA6NEY8 169 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 FRG2CA6NGY1 282 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 SAC3D1A6NKF1 404 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 PLOD2O00469 737 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 CLGNO14967 610 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 OR10H2O60403 315 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 KERAO60938 352 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 TIPRLO75663 272 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 FGF4P08620 206 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 ATP6V1B1P15313 513 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 ATP6V1B2P21281 511 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 LOXP28300 417 aaPredicted RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 EEFSECP57772 596 aaKnown RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 ATP6V0D1P61421 351 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 ERVK-8P63133 956 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 IGLV3-21P80748 117 aaPredicted RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 FUT7Q11130 342 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 BNIP2Q12982 314 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 APOFQ13790 326 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 SLBPQ14493 270 aaKnown RBP eCLIP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 EBPQ15125 230 aaKnown RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 HIST2H2ACQ16777 129 aaPredicted RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 PFKFB4Q16877 469 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 MTX3Q5HYI7 312 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 C6orf10Q5SRN2 563 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 FNDC7Q5VTL7 733 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 FAM219BQ5XKK7 198 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 KANK2Q63ZY3 851 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 BICRALQ6AI39 1079 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 HIST2H2AA3Q6FI13 130 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 SLC30A6Q6NXT4 461 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 ZNF474Q6S9Z5 364 aaPredicted RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 ANGPTL8Q6UXH0 198 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 SPATA19Q7Z5L4 167 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 AMIGO2Q86SJ2 522 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 IFNEQ86WN2 208 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 ANKFN1Q8N957 763 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 OR9I1Q8NGQ6 314 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 RHEBL1Q8TAI7 183 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 TRPC4APQ8TEL6 797 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 AKAP1Q92667 903 aaKnown RBP eCLIP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 RIT1Q92963 219 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 SLCO4A1Q96BD0 722 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 RHBDF1Q96CC6 855 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 TUBGCP3Q96CW5 907 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 DGCR14Q96DF8 476 aaKnown RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 C3orf30Q96M34 536 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 HS6ST2Q96MM7 605 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 EGFL8Q99944 293 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 HOPXQ9BPY8 73 aaPredicted RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 MAPKAP1Q9BPZ7 522 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 PIGQQ9BRB3 760 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 OPN3Q9H1Y3 402 aaPredicted RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 SLCO5A1Q9H2Y9 848 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 RPF2Q9H7B2 306 aaKnown RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 PRDM7Q9NQW5 492 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 GMPR2Q9P2T1 348 aaKnown RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 GIMAP2Q9UG22 337 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 TMCO1Q9UM00 188 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 EXO1Q9UQ84 846 aaKnown RBP8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 ERVK-19Q9WJR5 959 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 SNX13Q9Y5W8 968 aa8.04□□□□□ -1.12
SYNGAP1-205ENST00000470232 CR1P17927 2039 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 NPEPPSL1A6NEC2 478 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 AQP12BA6NM10 295 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 OVOL3O00110 214 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 GPR37O15354 613 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 EMC8O43402 210 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 KLF4O43474 513 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 AKAP10O43572 662 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 FGF17O60258 216 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 WDR47O94967 919 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 SIX3O95343 332 aaPredicted RBP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 CHEK2O96017 543 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 TFAP2AP05549 437 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 CD8BP10966 210 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 ZNF26P17031 533 aaPredicted RBP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 ZNF37AP17032 561 aaPredicted RBP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 NAGAP17050 411 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 ATP5A1P25705 553 aaKnown RBP8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 GALNSP34059 522 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 ACVR1BP36896 505 aa8.03□□□□□ -1.12
SYNGAP1-205ENST00000470232 SLC37A1P57057 533 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms