RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 TSSK3Q96PN8 268 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 TMEM204Q9BSN7 226 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 SRXN1Q9BYN0 137 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 C3orf14Q9HBI5 128 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 SH3BP4Q9P0V3 963 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 MCTS1Q9ULC4 181 aaKnown RBP10.94□□□□□ -0.66
HDAC3-204ENST00000469207 FIS1Q9Y3D6 152 aa10.94□□□□□ -0.66
HDAC3-204ENST00000469207 C9JVG2 144 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 CLOCKO15516 846 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 PDPK1O15530 556 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 NDUFS7O75251 213 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 CRCPO75575 148 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 GCM2O75603 506 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-204ENST00000469207 RSL1D1O76021 490 aaKnown RBP10.93□□□□□ -0.66
HDAC3-204ENST00000469207 SLITRK5O94991 958 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 SOX30O94993 753 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 SYNGR4O95473 234 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 PROCP04070 461 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 GSTA1P08263 222 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 MYL2P10916 166 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 FCGR2AP12318 317 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 PAX1P15863 534 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF17P17021 662 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 AGTR1P30556 359 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 CDKN1AP38936 164 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 PRIM2P49643 509 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 MANFP55145 182 aaKnown RBP10.93□□□□□ -0.66
HDAC3-204ENST00000469207 CARD18P57730 90 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 TOMM34Q15785 309 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-204ENST00000469207 RFTN2Q52LD8 501 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-204ENST00000469207 CBLN3Q6UW01 205 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 ZYG11AQ6WRX3 759 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 FRMD7Q6ZUT3 714 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 LSRQ86X29 649 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-204ENST00000469207 LILRA2Q8N149 483 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 ATP6V1C2Q8NEY4 427 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF775Q96BV0 537 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-204ENST00000469207 TUBB1Q9H4B7 451 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 RRAGDQ9NQL2 400 aaPredicted RBP10.93□□□□□ -0.66
HDAC3-204ENST00000469207 DCDC2Q9UHG0 476 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 STK38LQ9Y2H1 464 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 GPR52Q9Y2T5 361 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 KCNE3Q9Y6H6 103 aa10.93□□□□□ -0.66
HDAC3-204ENST00000469207 FREM1Q5H8C1 2179 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 A0A087WZY1 265 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 IGHV3-15A0A0B4J1V0 119 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 NPIPB8E9PQR5 432 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 CRLF1O75462 422 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 ABHD2P08910 425 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 LINGO3P0C6S8 592 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 LINC00032P0C843 101 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 DANCRP0C864 163 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 PPP3CBP16298 524 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 SDC1P18827 310 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 PTNP21246 168 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 EDNRAP25101 427 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 TAB1Q15750 504 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 CLEC12BQ2HXU8 276 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 NDUFAF6Q330K2 333 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 ESPNLQ6ZVH7 1005 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 CXXC5Q7LFL8 322 aaKnown RBP10.92□□□□□ -0.66
HDAC3-204ENST00000469207 CDRT4Q8N9R6 151 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 FAM76AQ8TAV0 307 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 ACMSDQ8TDX5 336 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 ZBTB8AQ96BR9 441 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 CXorf56Q9H5V9 222 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 REEP4Q9H6H4 257 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 LRTM1Q9HBL6 345 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 GIN1Q9NXP7 522 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 STOML1Q9UBI4 398 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 GIMAP2Q9UG22 337 aa10.92□□□□□ -0.66
HDAC3-204ENST00000469207 FBN3Q75N90 2809 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF814B7Z6K7 855 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 OVOL3O00110 214 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 PLIN3O60664 434 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 ADAP00813 363 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 TUBBP07437 444 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 UROSP10746 265 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 PSMB1P20618 241 aaKnown RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 ENPP1P22413 925 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 ACVR1BP36896 505 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF41P51814 821 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 RPS4XP62701 263 aaKnown RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 ZNF117Q03924 483 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 FAPQ12884 760 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 FOXF1Q12946 379 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 VEZF1Q14119 521 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 TMEM176BQ3YBM2 270 aaPredicted RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 CFAP157Q5JU67 520 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 NCMAPQ5T1S8 102 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 LRIG3Q6UXM1 1119 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 IKBIPQ70UQ0 350 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 TRMT10CQ7L0Y3 403 aaKnown RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 STK32CQ86UX6 486 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 LCA5Q86VQ0 697 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 GSPT2Q8IYD1 628 aaKnown RBP10.91□□□□□ -0.66
HDAC3-204ENST00000469207 GABRG1Q8N1C3 465 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 CEP70Q8NHQ1 597 aa10.91□□□□□ -0.66
HDAC3-204ENST00000469207 B4GALNT2Q8NHY0 566 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms