RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 SMARCD1Q96GM5 515 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 RBM18Q96H35 190 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CELF6Q96J87 481 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CXorf58Q96LI9 332 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TEFMQ96QE5 360 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CDCA3Q99618 268 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ATF6BQ99941 703 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CPPED1Q9BRF8 314 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 DOHHQ9BU89 302 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 DUSP26Q9BV47 211 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TRIM62Q9BVG3 475 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 MRIQ9BWK5 157 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TEX12Q9BXU0 123 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 GPR62Q9BZJ7 368 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ARL6Q9H0F7 186 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 MFSD1Q9H3U5 465 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 LRRN3Q9H3W5 708 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 OSGEPL1Q9H4B0 414 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TUBB1Q9H4B7 451 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CLMPQ9H6B4 373 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 METTL17Q9H7H0 456 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 PLEKHA1Q9HB21 404 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 FGF20Q9NP95 211 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 MIEF1Q9NQG6 463 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 DDX4Q9NQI0 724 aaKnown RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TREX1Q9NSU2 369 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 PARPBPQ9NWS1 579 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF226Q9NYT6 803 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TAS2R5Q9NYW4 299 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ABRACLQ9P1F3 81 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 WRAP73Q9P2S5 460 aaPredicted RBP4.55□□□□□ -1.68
SF3B1-207ENST00000468925 SLC17A6Q9P2U8 582 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 COMMD3Q9UBI1 195 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 RPS6KB2Q9UBS0 482 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 CA14Q9ULX7 337 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 TMED3Q9Y3Q3 217 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 HES2Q9Y543 173 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 NPFFR2Q9Y5X5 522 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 UBIAD1Q9Y5Z9 338 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ANKRD31Q8N7Z5 1873 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 BRWD3Q6RI45 1802 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 ABCA3Q99758 1704 aa4.55□□□□□ -1.68
SF3B1-207ENST00000468925 GOLGB1Q14789 3259 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 A0A087WZ62 844 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 KANTRA0A1W2PQU2 76 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 TMEM72A0PK05 275 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 LNP1A1A4G5 178 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 OR2M5A3KFT3 312 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 FITM1A5D6W6 292 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 OR6C75A6NL08 312 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 KDM4EB2RXH2 506 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SEC14L6B5MCN3 397 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 HSBP1L1C9JCN9 74 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 E9PI62 339 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 DCLK1O15075 740 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 MID1O15344 667 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 FZD7O75084 574 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SH3BGRLO75368 114 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF682O95780 498 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 EFEMP2O95967 443 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 PEX11BO96011 259 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SOD1P00441 154 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 OTCP00480 354 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 IGHV2-5P01817 119 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CSTBP04080 98 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ALDOBP05062 364 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CD2P06729 351 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SRPRAP08240 638 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ATXN1LP0C7T5 689 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 METTL15P1P0C7V9 234 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 C1GALT1C1LP0DN25 315 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CBSLP0DN79 551 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 MED14OSP0DP75 135 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ZNF14P17017 642 aaPredicted RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 BMP7P18075 431 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 GPX2P18283 190 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 FDXRP22570 491 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ITGA3P26006 1051 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 NMBRP28336 390 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 DDTP30046 118 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SSTR2P30874 369 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 MAT2AP31153 395 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 S100A3P33764 101 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CBSP35520 551 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 GLP1RP43220 463 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SRP9P49458 86 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CCR9P51686 369 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CRISP1P54107 249 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 ADPRHP54922 357 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 CLDN8P56748 225 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 NRG3P56975 720 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 RAB8AP61006 207 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 NUTF2P61970 127 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SNRPEP62304 92 aaKnown RBP4.54□□□□□ -1.68
SF3B1-207ENST00000468925 RAB1AP62820 205 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 BLOC1S1P78537 153 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 SLC7A9P82251 487 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 NAAAQ02083 359 aa4.54□□□□□ -1.68
SF3B1-207ENST00000468925 GLO1Q04760 184 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms