RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 SDF2Q99470 211 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 CGREF1Q99674 301 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 ELAC2Q9BQ52 826 aaKnown RBP3.22□□□□□ -1.89
TRIM59-202ENST00000468542 DOHHQ9BU89 302 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 OSBPL11Q9BXB4 747 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 TTTY12Q9BZ98 90 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 PAIP1Q9H074 479 aaKnown RBP3.22□□□□□ -1.89
TRIM59-202ENST00000468542 SERHL2Q9H4I8 314 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 TMEM38AQ9H6F2 299 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 ARMC7Q9H6L4 198 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 ZNF703Q9H7S9 590 aaPredicted RBP3.22□□□□□ -1.89
TRIM59-202ENST00000468542 PTGES2Q9H7Z7 377 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 METTL7AQ9H8H3 244 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 EVA1AQ9H8M9 152 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 PROK2Q9HC23 129 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 BCL2L10Q9HD36 194 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 A4GALTQ9NPC4 353 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 EXOSC3Q9NQT5 275 aaKnown RBP3.22□□□□□ -1.89
TRIM59-202ENST00000468542 DEPPQ9NTK1 212 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 OLAHQ9NV23 265 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 GID8Q9NWU2 228 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 NDE1Q9NXR1 346 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 SLC25A37Q9NYZ2 338 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 PLA2G3Q9NZ20 509 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 P2RX2Q9UBL9 471 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 SUCOQ9UBS9 1254 aaKnown RBP3.22□□□□□ -1.89
TRIM59-202ENST00000468542 C15orf41Q9Y2V0 281 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 PCDHB14Q9Y5E9 798 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 CSAG2Q9Y5P2 127 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 WIF1Q9Y5W5 379 aa3.22□□□□□ -1.89
TRIM59-202ENST00000468542 CACNA1CQ13936 2221 aa3.21□□□□□ -1.89
TRIM59-202ENST00000468542 DIDO1Q9BTC0 2240 aaKnown RBP3.21□□□□□ -1.89
TRIM59-202ENST00000468542 APCP25054 2843 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 LRBAP50851 2863 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 A0A087WZY1 265 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 A0A0G2JPF8 293 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 PRORSD1PA6NEY8 169 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 HNRNPCL2B2RXH8 293 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 HNRNPCL3B7ZW38 293 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 FAM47E-STBD1D6RA91 191 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 FAAHO00519 579 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 FBP2O00757 339 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SCDO00767 359 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 AQP7O14520 342 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ADAM10O14672 748 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 MRASO14807 208 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 BCKDKO14874 412 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 TFECO14948 347 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 NDUFB5O43674 189 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 EIF4E2O60573 245 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 HNRNPCL1O60812 293 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ICOSLGO75144 302 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 TNFRSF21O75509 655 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 PDE9AO76083 593 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ALX3O95076 343 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 UTS2O95399 124 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 CBX6O95503 412 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 CPSF4O95639 269 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 OXSR1O95747 527 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 IFNA14P01570 189 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 IGKV1D-16P01601 117 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 HPNP05981 417 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 DBIP07108 87 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 STSP08842 583 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 HOXD4P09016 255 aaPredicted RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 TFPTP0C1Z6 253 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 HNRNPCL4P0DMR1 293 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 CYP4B1P13584 511 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ZNF17P17021 662 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 MATN1P21941 496 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 RPS4Y1P22090 263 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SLC6A2P23975 617 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 FKBP2P26885 142 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ELK4P28324 431 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SRD5A2P31213 254 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 PTGER1P34995 402 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 PTGER4P35408 488 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 GCKP35557 465 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SOAT1P35610 550 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 PTGDSP41222 190 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 EIF1P41567 113 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 CRATP43155 626 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 MEOX1P50221 254 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 TDGF1P3P51864 188 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 PRKAG1P54619 331 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 GAS1P54826 345 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 NME5P56597 212 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 DSTNP60981 165 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ALDH6A1Q02252 535 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 TLE1Q04724 770 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 RBPJQ06330 500 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 NFYCQ13952 458 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 VEZF1Q14119 521 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 ELOAQ14241 798 aaKnown RBP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 KRT72Q14CN4 511 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 SF3B4Q15427 424 aaKnown RBP eCLIP3.21□□□□□ -1.9
TRIM59-202ENST00000468542 NNATQ16517 81 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 BCL2A1Q16548 175 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 FLYWCH1Q4VC44 716 aa3.21□□□□□ -1.9
TRIM59-202ENST00000468542 LIN52Q52LA3 116 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms