RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 WDR53Q7Z5U6 358 aaPredicted RBP9.42□□□□□ -0.9
MSH5-213ENST00000468136 COMTD1Q86VU5 262 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 CCDC71Q8IV32 467 aaPredicted RBP9.42□□□□□ -0.9
MSH5-213ENST00000468136 ERI1Q8IV48 349 aaKnown RBP9.42□□□□□ -0.9
MSH5-213ENST00000468136 MISPQ8IVT2 679 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 BCORP1Q8N888 145 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 OR5L2Q8NGL0 311 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 CNIH3Q8TBE1 160 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 SLC2A12Q8TD20 617 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 ZNF721Q8TF20 911 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 TMEM239Q8WW34 195 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 METTL21AQ8WXB1 218 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 MUL1Q969V5 352 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 OR6C1Q96RD1 312 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 SIGLEC11Q96RL6 698 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 ZPBPQ9BS86 351 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 COPS4Q9BT78 406 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 ITPAQ9BY32 194 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 SLC19A3Q9BZV2 496 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 VN1R1Q9GZP7 353 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 WDR54Q9H977 334 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 FBXO8Q9NRD0 319 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 PNO1Q9NRX1 252 aaKnown RBP9.42□□□□□ -0.9
MSH5-213ENST00000468136 SEMA4GQ9NTN9 838 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 IL20Q9NYY1 176 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 RPS6KB2Q9UBS0 482 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 MED31Q9Y3C7 131 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 PCDHGB6Q9Y5F9 930 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 CDH10Q9Y6N8 788 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 NINQ8N4C6 2090 aa9.42□□□□□ -0.9
MSH5-213ENST00000468136 A0A0B4J2E0 115 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 MYOCOSA0A1B0GUC4 107 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 A0A1B0GX12 115 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 VSTM2BA6NLU5 285 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 B4E171 279 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 D6RAR5 112 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 KLF4O43474 513 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 AHCYL1O43865 530 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 EIF4E2O60573 245 aaKnown RBP9.41□□□□□ -0.9
MSH5-213ENST00000468136 TPST2O60704 377 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 DDAH2O95865 285 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 CSTAP01040 98 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 CLPSP04118 112 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 CDK1P06493 297 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 KLK3P07288 261 aaPredicted RBP9.41□□□□□ -0.9
MSH5-213ENST00000468136 HEXBP07686 556 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 ZGLP1P0C6A0 271 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 PNMTP11086 282 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 POU2F1P14859 743 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 NAGAP17050 411 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 TBXA2RP21731 343 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 POU1F1P28069 291 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 EPHA2P29317 976 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 AVPR2P30518 371 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 FMO3P31513 532 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 CCKBRP32239 447 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 MPLP40238 635 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 TSPAN7P41732 249 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 PCYT1AP49585 367 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 PNLIPRP2P54317 469 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 NRG3P56975 720 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 E2F1Q01094 437 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 PRKCDQ05655 676 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 ZFP36L1Q07352 338 aaKnown RBP9.41□□□□□ -0.9
MSH5-213ENST00000468136 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.41□□□□□ -0.9
MSH5-213ENST00000468136 PMS2P3Q13401 168 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 TMED1Q13445 227 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 EFR3AQ14156 821 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 NCF4Q15080 339 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 ANKDD1AQ495B1 522 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 KLHL26Q53HC5 615 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 PDZK1Q5T2W1 519 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 SYT6Q5T7P8 510 aaPredicted RBP9.41□□□□□ -0.9
MSH5-213ENST00000468136 GTF2IRD2BQ6EKJ0 949 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 XAF1Q6GPH4 301 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 NPSR1Q6W5P4 371 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 GTF2IRD2Q86UP8 949 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 SLC34A3Q8N130 599 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 STX19Q8N4C7 294 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 METTL27Q8N6F8 245 aaPredicted RBP9.41□□□□□ -0.9
MSH5-213ENST00000468136 SIMC1Q8NDZ2 872 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 OR52L1Q8NGH7 329 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 NUBPLQ8TB37 319 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 STT3BQ8TCJ2 826 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 BRIX1Q8TDN6 353 aaKnown RBP9.41□□□□□ -0.9
MSH5-213ENST00000468136 ZFAND2BQ8WV99 257 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 APH1BQ8WW43 257 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 RFKQ969G6 155 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 ADIPOR1Q96A54 375 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 CLIP3Q96DZ5 547 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 WFDC6Q9BQY6 131 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 CDCA4Q9BXL8 241 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 FAM117AQ9C073 453 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 SEMA4CQ9C0C4 833 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 YIPF3Q9GZM5 350 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 OR8D2Q9GZM6 311 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 NDEL1Q9GZM8 345 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 CCDC90BQ9GZT6 254 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 RASSF1Q9NS23 344 aa9.41□□□□□ -0.9
MSH5-213ENST00000468136 DNAJB12Q9NXW2 375 aaKnown RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms