RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 GPATCH1Q9BRR8 931 aaKnown RBP17.21■□□□□ 0.35
COL7A1-207ENST00000467985 YIPF4Q9BSR8 244 aa17.21■□□□□ 0.35
COL7A1-207ENST00000467985 DUSP26Q9BV47 211 aa17.21■□□□□ 0.35
COL7A1-207ENST00000467985 HOXD1Q9GZZ0 328 aa17.21■□□□□ 0.35
COL7A1-207ENST00000467985 RAP2CQ9Y3L5 183 aa17.21■□□□□ 0.35
COL7A1-207ENST00000467985 AKAP6Q13023 2319 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 C7orf72A4D263 438 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 MSTNO14793 375 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 SEC14L5O43304 696 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 TNFSF13O75888 250 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 G6PDP11413 515 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 FCGR2AP12318 317 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 CD1EP15812 388 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 ATP6V1C1P21283 382 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 DNAJA1P31689 397 aaKnown RBP17.2■□□□□ 0.34
COL7A1-207ENST00000467985 ZNF41P51814 821 aaPredicted RBP17.2■□□□□ 0.34
COL7A1-207ENST00000467985 CLDN15P56746 228 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 CLDN8P56748 225 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 TP53BP2Q13625 1128 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 MPP2Q14168 576 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 PLXDC2Q6UX71 529 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 LUZP2Q86TE4 346 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 GTPBP8Q8N3Z3 284 aaPredicted RBP17.2■□□□□ 0.34
COL7A1-207ENST00000467985 ZNF527Q8NB42 609 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 OR5M1Q8NGP8 315 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 ADAMTS15Q8TE58 950 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 PINK1Q9BXM7 581 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 CXorf36Q9H7Y0 433 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 GALNT8Q9NY28 637 aa17.2■□□□□ 0.34
COL7A1-207ENST00000467985 SETD2Q9BYW2 2564 aaPredicted RBP17.19■□□□□ 0.34
COL7A1-207ENST00000467985 A8MXE2 369 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 CFLARO15519 480 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 ITM2AO43736 263 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 C6orf47O95873 294 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 DHRS4L1P0CG22 281 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 PCYT1AP49585 367 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 RPL14P50914 215 aaKnown RBP17.19■□□□□ 0.34
COL7A1-207ENST00000467985 SUCLG1P53597 346 aaKnown RBP17.19■□□□□ 0.34
COL7A1-207ENST00000467985 CLDN20P56880 219 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 PDCD2Q16342 344 aaPredicted RBP17.19■□□□□ 0.34
COL7A1-207ENST00000467985 MTERF4Q7Z6M4 381 aaKnown RBP17.19■□□□□ 0.34
COL7A1-207ENST00000467985 ZAR1Q86SH2 424 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 WDR75Q8IWA0 830 aaKnown RBP17.19■□□□□ 0.34
COL7A1-207ENST00000467985 METTL25Q8N6Q8 603 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 ZNF781Q8N8C0 355 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 CNEP1R1Q8N9A8 125 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 CDS1Q92903 461 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 DACH2Q96NX9 599 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 FBXO34Q9NWN3 711 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 PAQR5Q9NXK6 330 aaPredicted RBP17.19■□□□□ 0.34
COL7A1-207ENST00000467985 VDAC3Q9Y277 283 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 PCNX3Q9H6A9 2034 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 MTORP42345 2549 aa17.19■□□□□ 0.34
COL7A1-207ENST00000467985 MPDZO75970 2070 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 H3BNH8 94 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 GMFGO60234 142 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 SLC1A6P48664 564 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 SGCBQ16585 318 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 PGS1Q32NB8 556 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 CCNJQ5T5M9 372 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 FBXW10Q5XX13 1052 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 LRRC34Q8IZ02 419 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 GATSQ8NAP1 163 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 B4GALNT2Q8NHY0 566 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 SMPDL3BQ92485 455 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 FIG4Q92562 907 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 STARD4Q96DR4 205 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 OTUB1Q96FW1 271 aaPredicted RBP17.18■□□□□ 0.34
COL7A1-207ENST00000467985 AKTIPQ9H8T0 292 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 RNF122Q9H9V4 155 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 INTS9Q9NV88 658 aaKnown RBP17.18■□□□□ 0.34
COL7A1-207ENST00000467985 GPATCH2Q9NW75 528 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 NDRG3Q9UGV2 375 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 HAO1Q9UJM8 370 aa17.18■□□□□ 0.34
COL7A1-207ENST00000467985 H0YC42 278 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 ME2P23368 584 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 EIF1P41567 113 aaKnown RBP17.17■□□□□ 0.34
COL7A1-207ENST00000467985 ART1P52961 327 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 TPD52P55327 224 aaPredicted RBP17.17■□□□□ 0.34
COL7A1-207ENST00000467985 PON3Q15166 354 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 DCST2Q5T1A1 773 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 GGNQ86UU5 652 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 CDC20BQ86Y33 519 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 LINC01560Q8TB33 94 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 FNDC9Q8TBE3 224 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 ZNF395Q9H8N7 513 aaPredicted RBP17.17■□□□□ 0.34
COL7A1-207ENST00000467985 MED17Q9NVC6 651 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 ST6GALNAC2Q9UJ37 374 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 ABCA4P78363 2273 aa17.17■□□□□ 0.34
COL7A1-207ENST00000467985 NUP214P35658 2090 aaPredicted RBP17.16■□□□□ 0.34
COL7A1-207ENST00000467985 SH3D21A4FU49 640 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 DUXAA6NLW8 204 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 EIF1AYO14602 144 aaKnown RBP17.16■□□□□ 0.34
COL7A1-207ENST00000467985 SMNDC1O75940 238 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL7A1-207ENST00000467985 CPOXP36551 454 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 KIR2DL2P43627 348 aaPredicted RBP17.16■□□□□ 0.34
COL7A1-207ENST00000467985 WDR4P57081 412 aaKnown RBP17.16■□□□□ 0.34
COL7A1-207ENST00000467985 RAC1P63000 192 aa17.16■□□□□ 0.34
COL7A1-207ENST00000467985 HBA1P69905 142 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms