RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 ACOT12Q8WYK0 555 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF707Q96C28 371 aaPredicted RBP12.91□□□□□ -0.34
BRAT1-203ENST00000467558 TEX101Q9BY14 249 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 HPF1Q9NWY4 346 aa12.91□□□□□ -0.34
BRAT1-203ENST00000467558 A0A1B0GTL3 188 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 LRRN3E7EW58 273 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 M0R129 80 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 GATBO75879 557 aaKnown RBP12.9□□□□□ -0.34
BRAT1-203ENST00000467558 CD63P08962 238 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 DNASE1L3Q13609 305 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 LTB4RQ15722 352 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 TMEM64Q6YI46 380 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 RNF113BQ8IZP6 322 aaKnown RBP12.9□□□□□ -0.34
BRAT1-203ENST00000467558 LRRN3Q9H3W5 708 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 FGF21Q9NSA1 209 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 PRKRAO75569 313 aaKnown RBP12.9□□□□□ -0.34
BRAT1-203ENST00000467558 PDE7AQ13946 482 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 TBCEQ15813 527 aaPredicted RBP12.9□□□□□ -0.34
BRAT1-203ENST00000467558 ZNF578Q96N58 590 aaPredicted RBP12.9□□□□□ -0.34
BRAT1-203ENST00000467558 ENPP5Q9UJA9 477 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 A0A1W2PPK0 400 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 FXYD1O00168 92 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 FOXD2O60548 495 aaPredicted RBP12.9□□□□□ -0.34
BRAT1-203ENST00000467558 CTNSO60931 367 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 CISD3P0C7P0 127 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 MAT1AQ00266 395 aaKnown RBP12.9□□□□□ -0.34
BRAT1-203ENST00000467558 HSF2Q03933 536 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 GAB1Q13480 694 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 CBFBQ13951 182 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 WBP2NLQ6ICG8 309 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 ABHD11Q8NFV4 315 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 ADAMTS19Q8TE59 1207 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 FRMD6Q96NE9 622 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 ALG8Q9BVK2 526 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 DDX31Q9H8H2 851 aaKnown RBP12.9□□□□□ -0.34
BRAT1-203ENST00000467558 LYRM4Q9HD34 91 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 SPHK1Q9NYA1 384 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 DHDHQ9UQ10 334 aa12.9□□□□□ -0.34
BRAT1-203ENST00000467558 TRBV4-1A0A0J9YWV2 114 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 TSPAN11A1L157 253 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 TMX2-CTNND1H3BSU7 103 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 KDM4BO94953 1096 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 CEACAM5P06731 702 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 GRPRP30550 384 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 FOLR3P41439 243 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 PPP2CBP62714 309 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 PPP2CAP67775 309 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 TLE3Q04726 772 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF181Q2M3W8 571 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 PGGHGQ32M88 737 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 TBC1D25Q3MII6 688 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 LRRN1Q6UXK5 716 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF782Q6ZMW2 699 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-203ENST00000467558 B3GNT8Q7Z7M8 397 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 AGBL5Q8NDL9 886 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 OR14A16Q8NHC5 309 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 QRSL1Q9H0R6 528 aaKnown RBP12.89□□□□□ -0.35
BRAT1-203ENST00000467558 THSD1Q9NS62 852 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 ANKRD28O15084 1053 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 IL33O95760 270 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 PRKAR1BP31321 381 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 HYAL1Q12794 435 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 GPR19Q15760 415 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 LEXMQ3ZCV2 418 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 SLC18B1Q6NT16 456 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 MEX3DQ86XN8 651 aaKnown RBP12.89□□□□□ -0.35
BRAT1-203ENST00000467558 HAVCR2Q8TDQ0 301 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 NXPE2Q96DL1 559 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 MRGPRX3Q96LB0 322 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 WASH6PQ9NQA3 447 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 NDUFAF4Q9P032 175 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 PTRH2Q9Y3E5 179 aaKnown RBP12.89□□□□□ -0.35
BRAT1-203ENST00000467558 TRIP11Q15643 1979 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 CENPBD1B2RD01 187 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 ZFAND5O76080 213 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 GASTP01350 101 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 C21orf33P30042 268 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-203ENST00000467558 PLP2Q04941 152 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 MFSD12Q6NUT3 480 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 ALDH16A1Q8IZ83 802 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 ARL14Q8N4G2 192 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 OR5T3Q8NGG3 340 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 DAPP1Q9UN19 280 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 GRIP1Q9Y3R0 1128 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 PLXNB2O15031 1838 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 HTR3EA5X5Y0 456 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 ZNF43P17038 809 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 CFL1P23528 166 aaKnown RBP12.89□□□□□ -0.35
BRAT1-203ENST00000467558 RBMS1P29558 406 aaKnown RBP12.89□□□□□ -0.35
BRAT1-203ENST00000467558 PPP5CP53041 499 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 C14orf28Q4W4Y0 310 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 CDH24Q86UP0 819 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 EID2Q8N6I1 236 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 TMEM163Q8TC26 289 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 ZMYND19Q96E35 227 aaPredicted RBP12.89□□□□□ -0.35
BRAT1-203ENST00000467558 HRASLS5Q96KN8 279 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 FANCFQ9NPI8 374 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 PCDHB16Q9NRJ7 776 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 SLC25A37Q9NYZ2 338 aa12.89□□□□□ -0.35
BRAT1-203ENST00000467558 ICKQ9UPZ9 632 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms