RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TPST2O60704 377 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 DUSP14O95147 198 aaKnown RBP3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 CD55P08174 381 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 H2BFMP0C1H6 154 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 GPR89BP0CG08 455 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 IGHV1-2P23083 117 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 EFNA3P52797 238 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 AP3M2P53677 418 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 ERVPABLB-1P60509 514 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 RPL32P62910 135 aaKnown RBP3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 VLDLRP98155 873 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 CD47Q08722 323 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 ASAH1Q13510 395 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 CHI3L2Q15782 390 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 NDUFA9Q16795 377 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 PVRIGQ6DKI7 326 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 SYT10Q6XYQ8 523 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 CNPY4Q8N129 248 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 CLDN19Q8N6F1 224 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 SYT14Q8NB59 555 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 STEAP2Q8NFT2 490 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 OR10A7Q8NGE5 316 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 OR2T3Q8NH03 318 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 RHOXF1Q8NHV9 184 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 CCDC26Q8TAB7 109 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 CNIH3Q8TBE1 160 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 TRMT10AQ8TBZ6 339 aaKnown RBP3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 TTC25Q96NG3 672 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 RANBP9Q96S59 729 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 SLC6A7Q99884 636 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 CITED1Q99966 193 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 DPH7Q9BTV6 452 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 WRAP73Q9P2S5 460 aaPredicted RBP3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 RNF14Q9UBS8 474 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 NAALAD2Q9Y3Q0 740 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 KDRP35968 1356 aa3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 COL2A1P02458 1487 aaPredicted RBP3.33□□□□□ -1.88
CDC42BPA-211ENST00000466538 C15orf38-AP3S2A0A0A6YYH1 394 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 IGHV3-35A0A0C4DH35 117 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 SAGE2PA6NJ88 616 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 K7EQM0 130 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 NOL4O94818 638 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 CPN1P15169 458 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 GCFC2P16383 781 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 BDKRB1P46663 353 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 DHPSP49366 369 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 RGS4P49798 205 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 LMO4P61968 165 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 OTUD4Q01804 1114 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 PEX6Q13608 980 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 TGIF1Q15583 401 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 GLYR1Q49A26 553 aaPredicted RBP3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 SLC25A30Q5SVS4 291 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 UTF1Q5T230 341 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 FAM71F2Q6NXP2 309 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 VASH2Q86V25 355 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 TBC1D21Q8IYX1 336 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 ZNF683Q8IZ20 524 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 MCOLN2Q8IZK6 566 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 CADM2Q8N3J6 435 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 TRUB1Q8WWH5 349 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 OR5B2Q96R09 309 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 ZNF607Q96SK3 696 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 TUBGCP2Q9BSJ2 902 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 MEAF6Q9HAF1 191 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 PNO1Q9NRX1 252 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 GNG12Q9UBI6 72 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 SLC2A6Q9UGQ3 507 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 RSPH14Q9UHP6 348 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 MRPS33Q9Y291 106 aaKnown RBP3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 OARD1Q9Y530 152 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 FRMPD4Q14CM0 1322 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 ANKRD30BQ9BXX2 1392 aa3.32□□□□□ -1.88
CDC42BPA-211ENST00000466538 PTCH1Q13635 1447 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 PNPLA6Q8IY17 1366 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 MSH4O15457 936 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 UGT2B17O75795 530 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 NEBLO76041 1014 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 TM7SF2O76062 418 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 THY1P04216 161 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 UGT2B4P06133 528 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 IQCF3P0C7M6 154 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 SLC35E2P0CK97 266 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 SERPINA2P20848 420 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 HNMTP50135 292 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 ARFIP1P53367 373 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 CXCL6P80162 114 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 MRPS11P82912 194 aaKnown RBP3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 SERTAD2Q14140 314 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 QRICH1Q2TAL8 776 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 MARC1Q5VT66 337 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 PYHIN1Q6K0P9 492 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 CGB2Q6NT52 195 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 ACSM5Q6NUN0 579 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 PAMR1Q6UXH9 720 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 Q6ZR54 194 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 TMEM110Q86TL2 294 aa3.31□□□□□ -1.88
CDC42BPA-211ENST00000466538 ACOT1Q86TX2 421 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms