RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ZCCHC12Q6PEW1 402 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 C22orf34Q6ZV56 151 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 Q71RC1 249 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-206ENST00000466532 R3HCC1LQ7Z5L2 792 aaKnown RBP17.17■□□□□ 0.34
COL9A3-206ENST00000466532 LRRC75A-AS1Q8N1F1 130 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 OR6K3Q8NGY3 331 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 ACTRT2Q8TDY3 377 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 TWIST2Q8WVJ9 160 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 FAM120BQ96EK7 910 aaKnown RBP17.17■□□□□ 0.34
COL9A3-206ENST00000466532 GMPPAQ96IJ6 420 aaPredicted RBP17.17■□□□□ 0.34
COL9A3-206ENST00000466532 ADGRG7Q96K78 797 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 MARK4Q96L34 752 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 RNF145Q96MT1 663 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 HS3ST6Q96QI5 342 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 CCL19Q99731 98 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 PLSCR4Q9NRQ2 329 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 UBQLN4Q9NRR5 601 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 ZCCHC3Q9NUD5 404 aaKnown RBP17.17■□□□□ 0.34
COL9A3-206ENST00000466532 MED17Q9NVC6 651 aa17.17■□□□□ 0.34
COL9A3-206ENST00000466532 C7orf72A4D263 438 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 TNFSF11O14788 317 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 PIP5K1BO14986 540 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 CXCL13O43927 109 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 SYNGR4O95473 234 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 DDX5P17844 614 aaKnown RBP17.16■□□□□ 0.34
COL9A3-206ENST00000466532 HPCAL1P37235 193 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 RAC1P63000 192 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 LTBQ06643 244 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 CTU2Q2VPK5 515 aaKnown RBP17.16■□□□□ 0.34
COL9A3-206ENST00000466532 CPTPQ5TA50 214 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 MISPQ8IVT2 679 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 HOMEZQ8IX15 550 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 B4GALNT2Q8NHY0 566 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 CAVIN3Q969G5 261 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 CHMP6Q96FZ7 201 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 APOPT1Q96IL0 206 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 TMEM185BQ9H7F4 350 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 ZNF395Q9H8N7 513 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-206ENST00000466532 SIRT3Q9NTG7 399 aaPredicted RBP17.16■□□□□ 0.34
COL9A3-206ENST00000466532 MKS1Q9NXB0 559 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 GIMAP2Q9UG22 337 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 TRAF6Q9Y4K3 522 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 FREM1Q5H8C1 2179 aa17.16■□□□□ 0.34
COL9A3-206ENST00000466532 A0A1W2PQD3 144 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 TLDC2A0PJX2 215 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 TMEM114B3SHH9 223 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 SCAMP2O15127 329 aaKnown RBP17.15■□□□□ 0.34
COL9A3-206ENST00000466532 NPHS1O60500 1241 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 SS18L1O75177 396 aaPredicted RBP17.15■□□□□ 0.34
COL9A3-206ENST00000466532 HSPA4LO95757 839 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 HMGN2P05204 90 aaKnown RBP17.15■□□□□ 0.34
COL9A3-206ENST00000466532 FGF4P08620 206 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 ME2P23368 584 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 PSMA4P25789 261 aaKnown RBP17.15■□□□□ 0.34
COL9A3-206ENST00000466532 LOXP28300 417 aaPredicted RBP17.15■□□□□ 0.34
COL9A3-206ENST00000466532 ALDH3A1P30838 453 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 POU6F2P78424 691 aaPredicted RBP17.15■□□□□ 0.34
COL9A3-206ENST00000466532 LASP1Q14847 261 aaKnown RBP17.15■□□□□ 0.34
COL9A3-206ENST00000466532 MLC1Q15049 377 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 UGT3A2Q3SY77 523 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 ARL13AQ5H913 290 aaPredicted RBP17.15■□□□□ 0.34
COL9A3-206ENST00000466532 EXOSC6Q5RKV6 272 aaKnown RBP17.15■□□□□ 0.34
COL9A3-206ENST00000466532 LRIG3Q6UXM1 1119 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 C20orf204Q6ZNR8 217 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 ESPNLQ6ZVH7 1005 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 OR2V1Q8NHB1 315 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 CDS1Q92903 461 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 KLHDC3Q9BQ90 382 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 BTBD2Q9BX70 525 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 EML4Q9HC35 981 aaKnown RBP17.15■□□□□ 0.34
COL9A3-206ENST00000466532 ATP6V1HQ9UI12 483 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 PRR14LQ5THK1 2151 aa17.15■□□□□ 0.34
COL9A3-206ENST00000466532 A0A0J9YW62 118 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 ADAMDEC1O15204 470 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 PPP3CBP16298 524 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 IL11P20809 199 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 MAPK1P28482 360 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 RPL3P39023 403 aaKnown RBP17.14■□□□□ 0.33
COL9A3-206ENST00000466532 CD226Q15762 336 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 PDSS1Q5T2R2 415 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 HBMQ6B0K9 141 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 CLEC9AQ6UXN8 241 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 BANPQ8N9N5 519 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 OR7A2PQ8NGA2 310 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 OR2W6PQ8NHA6 318 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 POC1BQ8TC44 478 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 AGR3Q8TD06 166 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 PPP3R2Q96LZ3 170 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 STACQ99469 402 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 MECRQ9BV79 373 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 DUSP22Q9NRW4 184 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 GLRX2Q9NS18 164 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 SNX8Q9Y5X2 465 aa17.14■□□□□ 0.33
COL9A3-206ENST00000466532 NSD1Q96L73 2696 aaPredicted RBP17.14■□□□□ 0.33
COL9A3-206ENST00000466532 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.13■□□□□ 0.33
COL9A3-206ENST00000466532 PEX11AO75192 247 aa17.13■□□□□ 0.33
COL9A3-206ENST00000466532 THBDP07204 575 aa17.13■□□□□ 0.33
COL9A3-206ENST00000466532 ATP6V1C1P21283 382 aa17.13■□□□□ 0.33
COL9A3-206ENST00000466532 STAC2Q6ZMT1 411 aa17.13■□□□□ 0.33
COL9A3-206ENST00000466532 TRABD2AQ86V40 505 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms