RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 NAF1Q96HR8 494 aaKnown RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 THOC3Q96J01 351 aaKnown RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 EPYCQ99645 322 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 ZNF559Q9BR84 538 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 SCNM1Q9BWG6 230 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 POLR2J2Q9GZM3 115 aaKnown RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 POLR2J3Q9H1A7 115 aaKnown RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 ATP13A2Q9NQ11 1180 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 C8orf4Q9NR00 106 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 CTPS2Q9NRF8 586 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 DNAJB12Q9NXW2 375 aaKnown RBP11.15□□□□□ -0.62
VPS16-206ENST00000466415 KLRF1Q9NZS2 232 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 ABI3Q9P2A4 366 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 KIF17Q9P2E2 1029 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 TEKT2Q9UIF3 430 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 TMCC3Q9ULS5 477 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 SEC16AO15027 2179 aa11.15□□□□□ -0.62
VPS16-206ENST00000466415 WDR87Q6ZQQ6 2873 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 CCDC88CQ9P219 2028 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 ZNF891A8MT65 544 aaPredicted RBP11.14□□□□□ -0.63
VPS16-206ENST00000466415 NDUFB5O43674 189 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 PEX1O43933 1283 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 PRSS23O95084 383 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 H1F0P07305 194 aaKnown RBP11.14□□□□□ -0.63
VPS16-206ENST00000466415 GKN3PP0CG01 181 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 PRKAR1AP10644 381 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 SOX3P41225 446 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 IST1P53990 364 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 MLF1P58340 268 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 FOXD4Q12950 439 aaPredicted RBP11.14□□□□□ -0.63
VPS16-206ENST00000466415 PPP1R8Q12972 351 aaKnown RBP11.14□□□□□ -0.63
VPS16-206ENST00000466415 CLN3Q13286 438 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 NPTX1Q15818 432 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 MEP1AQ16819 746 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 KLHL26Q53HC5 615 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 COLEC12Q5KU26 742 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 OTUD3Q5T2D3 398 aaPredicted RBP11.14□□□□□ -0.63
VPS16-206ENST00000466415 DESI1Q6ICB0 168 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 SHQ1Q6PI26 577 aaKnown RBP11.14□□□□□ -0.63
VPS16-206ENST00000466415 IZUMO2Q6UXV1 221 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 ZNF605Q86T29 641 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 STK32CQ86UX6 486 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 EPHX4Q8IUS5 362 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 MISPQ8IVT2 679 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 GALNT4Q8N4A0 578 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 CBR4Q8N4T8 237 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 PACRGLQ8N7B6 248 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 POGLUT1Q8NBL1 392 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 OR52J3Q8NH60 311 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 RNF217Q8TC41 542 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 BRIX1Q8TDN6 353 aaKnown RBP11.14□□□□□ -0.63
VPS16-206ENST00000466415 THAP4Q8WY91 577 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 TTC9Q92623 222 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 RSPO3Q9BXY4 272 aaPredicted RBP11.14□□□□□ -0.63
VPS16-206ENST00000466415 METTL7AQ9H8H3 244 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 COQ10BQ9H8M1 238 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 NTN4Q9HB63 628 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 TMEM27Q9HBJ8 222 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 HPF1Q9NWY4 346 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 SELENONQ9NZV5 590 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 RHCGQ9UBD6 479 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 RPS6KB2Q9UBS0 482 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 CHST2Q9Y4C5 530 aa11.14□□□□□ -0.63
VPS16-206ENST00000466415 ARGFXA6NJG6 315 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 ALG1L2C9J202 215 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 PDLIM1O00151 329 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 EI24O14681 340 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 ZNF264O43296 627 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 ZNF354AO60765 605 aaPredicted RBP11.13□□□□□ -0.63
VPS16-206ENST00000466415 FMO6PO60774 539 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 OR5F1O95221 314 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 ANGPTL1O95841 491 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 ADH7P40394 386 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 CASRP41180 1078 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 COPZ1P61923 177 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 HOXC5Q00444 222 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 Q0VFX4 171 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 ST3GAL3Q11203 375 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 PIN1Q13526 163 aaPredicted RBP11.13□□□□□ -0.63
VPS16-206ENST00000466415 CD226Q15762 336 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 NTRK2Q16620 822 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 EXOC3L2Q2M3D2 409 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 NDUFAF6Q330K2 333 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 IQCCQ4KMZ1 466 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 ENTPD8Q5MY95 495 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 ATP1A1-AS1Q5TC04 95 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 IL20RBQ6UXL0 311 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 TSEN54Q7Z6J9 526 aaKnown RBP11.13□□□□□ -0.63
VPS16-206ENST00000466415 MARCH3Q86UD3 253 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 PACS2Q86VP3 889 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 OFCC1Q8IZS5 231 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 ZNF248Q8NDW4 579 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 OR10G3Q8NGC4 313 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 FGF11Q92914 225 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 HGDQ93099 445 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 NRBF2Q96F24 287 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 SLC41A3Q96GZ6 507 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 SH3YL1Q96HL8 342 aaPredicted RBP11.13□□□□□ -0.63
VPS16-206ENST00000466415 NODALQ96S42 347 aa11.13□□□□□ -0.63
VPS16-206ENST00000466415 RBM4BQ9BQ04 359 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms