RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 KCNE5Q9UJ90 142 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 PCDHGB4Q9UN71 923 aa11.71□□□□□ -0.53
XRN1-203ENST00000463916 CENPVL1A0A0U1RR11 272 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 H3BML4 177 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 SASH3O75995 380 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 PGRP06401 933 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 HPGDP15428 266 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 LCN1P31025 176 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 CDKN2CP42773 168 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 KRTAP10-9P60411 292 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 SF3B4Q15427 424 aaKnown RBP eCLIP11.71□□□□□ -0.548e-7■■□□□ 12.3
XRN1-203ENST00000463916 BCL2A1Q16548 175 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 SLC25A35Q3KQZ1 300 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 BHLHB9Q6PI77 547 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 CBLN3Q6UW01 205 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 ACTRT2Q8TDY3 377 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 ZNF524Q96C55 264 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 CCDC115Q96NT0 180 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 UCN2Q96RP3 112 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 RUBCNLQ9H714 662 aa11.71□□□□□ -0.54
XRN1-203ENST00000463916 A0A1W2PQD3 144 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 KRT16P08779 473 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 POU3F2P20265 443 aaPredicted RBP11.7□□□□□ -0.54
XRN1-203ENST00000463916 ATP6V1C1P21283 382 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 UQCRC2P22695 453 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 ZNF117Q03924 483 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 DPY19L1Q2PZI1 675 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 NDUFAF6Q330K2 333 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 FLYWCH1Q4VC44 716 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 SAXO2Q658L1 398 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 GDF7Q7Z4P5 450 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 VPS37AQ8NEZ2 397 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 GOT1L1Q8NHS2 421 aaPredicted RBP11.7□□□□□ -0.54
XRN1-203ENST00000463916 MIPOL1Q8TD10 442 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 RAB8BQ92930 207 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 SLC35G5Q96KT7 338 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 OR52E6Q96RD3 313 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 PIGQQ9BRB3 760 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 OR51I1Q9H343 314 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 USH1CQ9Y6N9 552 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 MED12LQ86YW9 2145 aa11.7□□□□□ -0.54
XRN1-203ENST00000463916 PRAMEF27A3QJZ7 478 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 DVL2O14641 736 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 SEC14L5O43304 696 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 DIAPH2O60879 1101 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 OPN1LWP04000 364 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 GSNP06396 782 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 OR12D1P0DN82 309 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 PEPDP12955 493 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 CTSSP25774 331 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 PSMA4P25789 261 aaKnown RBP11.69□□□□□ -0.54
XRN1-203ENST00000463916 FUT5Q11128 374 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 PLPPR5Q32ZL2 321 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 GLYR1Q49A26 553 aaPredicted RBP11.69□□□□□ -0.54
XRN1-203ENST00000463916 TNFAIP8L2Q6P589 184 aaPredicted RBP11.69□□□□□ -0.54
XRN1-203ENST00000463916 EPGNQ6UW88 154 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 GCNT2Q8N0V5 402 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 CHDHQ8NE62 594 aaPredicted RBP11.69□□□□□ -0.54
XRN1-203ENST00000463916 OR9I1Q8NGQ6 314 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 PHOSPHO1Q8TCT1 267 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 WNT2BQ93097 391 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 NEURL3Q96EH8 262 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 DTNBP1Q96EV8 351 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 ZNF845Q96IR2 970 aaPredicted RBP11.69□□□□□ -0.54
XRN1-203ENST00000463916 C7orf26Q96N11 449 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 SLC35A5Q9BS91 424 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 VIPAS39Q9H9C1 493 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 SLC6A13Q9NSD5 602 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 MED17Q9NVC6 651 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 BTNL2Q9UIR0 455 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 MKLN1Q9UL63 735 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 CARD8Q9Y2G2 431 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 HRNRQ86YZ3 2850 aaPredicted RBP11.69□□□□□ -0.54
XRN1-203ENST00000463916 CREBBPQ92793 2442 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 DUXAA6NLW8 204 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 SYT5O00445 386 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 HCRTR2O43614 444 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 SOX30O94993 753 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 RCBTB2O95199 551 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 IDO1P14902 403 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 IL11P20809 199 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 ATP12AP54707 1039 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 ARHGAP11BQ3KRB8 267 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 HEPHL1Q6MZM0 1159 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 GGNQ86UU5 652 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 B4GALNT2Q8NHY0 566 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 POC1BQ8TC44 478 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 LRRC8CQ8TDW0 803 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 XAGE5Q8WWM1 108 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 SMPDL3BQ92485 455 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 INTS12Q96CB8 462 aaKnown RBP11.69□□□□□ -0.54
XRN1-203ENST00000463916 ZG16BQ96DA0 208 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 ARSGQ96EG1 525 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 PANX1Q96RD7 426 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 HOXD1Q9GZZ0 328 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 SDR39U1Q9NRG7 319 aaPredicted RBP11.69□□□□□ -0.54
XRN1-203ENST00000463916 ICAM5Q9UMF0 924 aa11.69□□□□□ -0.54
XRN1-203ENST00000463916 MYO9AB2RTY4 2548 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 AKAP9Q99996 3911 aa11.68□□□□□ -0.54
XRN1-203ENST00000463916 CCDC154A6NI56 674 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms