RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 TGIF2LYQ8IUE0 185 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 CRLF3Q8IUI8 442 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 P3H2Q8IVL5 708 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 DDIASQ8IXT1 998 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 CLYBLQ8N0X4 340 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 C1orf52Q8N6N3 182 aaKnown RBP3.34□□□□□ -1.88
SCFD1-204ENST00000463622 MFSD9Q8NBP5 474 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 SPATA3Q8NHX4 192 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 UTP15Q8TED0 518 aaKnown RBP3.34□□□□□ -1.88
SCFD1-204ENST00000463622 DOK4Q8TEW6 326 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 SELENOMQ8WWX9 145 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 MS4A6EQ96DS6 147 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 TM4SF19Q96DZ7 209 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 ZNF285Q96NJ3 590 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 QRFPRQ96P65 431 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 HAUS8Q9BT25 410 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 TRMOQ9BU70 441 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 SARGQ9BW04 601 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 NMUR2Q9GZQ4 415 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 RHBGQ9H310 441 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 EHD1Q9H4M9 534 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 MEAF6Q9HAF1 191 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 SLC22A11Q9NSA0 550 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 P4HTMQ9NXG6 502 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 ARMCX1Q9P291 453 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 DHCR7Q9UBM7 475 aaKnown RBP3.34□□□□□ -1.88
SCFD1-204ENST00000463622 DNAJB11Q9UBS4 358 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 STEAP1Q9UHE8 339 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 BAIAP2L1Q9UHR4 511 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 TMCO1Q9UM00 188 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 SLC12A4Q9UP95 1085 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 ERVK-11Q9UQG0 969 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 KLK4Q9Y5K2 254 aa3.34□□□□□ -1.88
SCFD1-204ENST00000463622 PRRC2AP48634 2157 aaKnown RBP3.34□□□□□ -1.88
SCFD1-204ENST00000463622 ASPDHA6ND91 283 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 LRIT2A6NDA9 550 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 AQP7P3A6NL99 342 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 CCL21O00585 134 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 HDAC3O15379 428 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 NDUFS4O43181 175 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 UGDHO60701 494 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 CNOT3O75175 753 aaKnown RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 NME6O75414 186 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 ZBTB11O95625 1053 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 FAM107AO95990 144 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 MT-ND5P03915 603 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 EIF2S1P05198 315 aaKnown RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 ENO1P06733 434 aaKnown RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 SMIM10L1P0DMW3 83 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 SDC1P18827 310 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 EFNA1P20827 205 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 GALNSP34059 522 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 SERPINB5P36952 375 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 CA7P43166 264 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 ART1P52961 327 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 PLA2G16P53816 162 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 HNRNPH2P55795 449 aaKnown RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 KCNK10P57789 538 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 ABATP80404 500 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 ADORA2A-AS1P86434 159 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 TLE4Q04727 773 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 RUNX2Q13950 521 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 GALEQ14376 348 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 PTGR1Q14914 329 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 MPEG1Q2M385 716 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 GALNTL6Q49A17 601 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 C4orf46Q504U0 113 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 WASHC2DQ5SRD0 308 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 LIPJQ5W064 366 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 NXNQ6DKJ4 435 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 METTL2BQ6P1Q9 378 aaKnown RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 KLHL35Q6PF15 583 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 COX15Q7KZN9 410 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 ASPGQ86U10 573 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 TMEM126BQ8IUX1 230 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 FUNDC1Q8IVP5 155 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 SAMD14Q8IZD0 417 aaPredicted RBP3.33□□□□□ -1.88
SCFD1-204ENST00000463622 KRTCAP2Q8N6L1 136 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 BCORP1Q8N888 145 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 CLEC1AQ8NC01 280 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 OR9A4Q8NGU2 314 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 CCT6BQ92526 530 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 NR4A3Q92570 626 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 SMIM10Q96HG1 83 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 VPS50Q96JG6 964 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 SNX22Q96L94 193 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 FCRL1Q96LA6 429 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 TAAR6Q96RI8 345 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 CSF3RQ99062 836 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 FOXC2Q99958 501 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 C17orf62Q9BQA9 187 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 AIF1LQ9BQI0 150 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 EFCAB11Q9BUY7 163 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 TM2D2Q9BX73 214 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 MYLK2Q9H1R3 596 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 ELOVL6Q9H5J4 265 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 NT5DC2Q9H857 520 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 SAP30LQ9HAJ7 183 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 SLC52A3Q9NQ40 469 aa3.33□□□□□ -1.88
SCFD1-204ENST00000463622 OLAHQ9NV23 265 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms