RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 WDR75Q8IWA0 830 aaKnown RBP18.46■□□□□ 0.55
PDLIM4-205ENST00000463615 CNEP1R1Q8N9A8 125 aa18.46■□□□□ 0.55
PDLIM4-205ENST00000463615 FNDC5Q8NAU1 212 aa18.46■□□□□ 0.55
PDLIM4-205ENST00000463615 FBXO30Q8TB52 745 aa18.46■□□□□ 0.55
PDLIM4-205ENST00000463615 AGR3Q8TD06 166 aa18.46■□□□□ 0.55
PDLIM4-205ENST00000463615 SFXN5Q8TD22 340 aa18.46■□□□□ 0.55
PDLIM4-205ENST00000463615 ACTRT3Q9BYD9 372 aa18.46■□□□□ 0.55
PDLIM4-205ENST00000463615 HOXD1Q9GZZ0 328 aa18.46■□□□□ 0.55
PDLIM4-205ENST00000463615 MED17Q9NVC6 651 aa18.46■□□□□ 0.55
PDLIM4-205ENST00000463615 VDAC3Q9Y277 283 aa18.46■□□□□ 0.55
PDLIM4-205ENST00000463615 SCDO00767 359 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 SNUPNO95149 360 aaKnown RBP18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 HPGDP15428 266 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 IL11P20809 199 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 EFNA1P20827 205 aaPredicted RBP18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 CCT3P49368 545 aaKnown RBP18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 EMX2Q04743 252 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 FAM27E3Q08E93 113 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 FAM214BQ7L5A3 538 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 GALNT10Q86SR1 603 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 NUDCD3Q8IVD9 361 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 SLC39A3Q9BRY0 314 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 C1orf50Q9BV19 199 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 CXorf36Q9H7Y0 433 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 ACTL7BQ9Y614 415 aa18.45■□□□□ 0.54
PDLIM4-205ENST00000463615 A0A1W2PPR1 153 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 SHISA8B8ZZ34 492 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 CASKO14936 926 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 BIRC5O15392 142 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 CTIFO43310 598 aaKnown RBP18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 SKAP2O75563 359 aaPredicted RBP18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 SMNDC1O75940 238 aaKnown RBP eCLIP18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 AQP8O94778 261 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 LINGO3P0C6S8 592 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 CPOXP36551 454 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 CLDN8P56748 225 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 CD226Q15762 336 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 CCNJQ5T5M9 372 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 FBXW10Q5XX13 1052 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 ESPNLQ6ZVH7 1005 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 KRTCAP2Q8N6L1 136 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 B4GALNT2Q8NHY0 566 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 POC1BQ8TC44 478 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 JADE3Q92613 823 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 CDS1Q92903 461 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 TUBGCP3Q96CW5 907 aa18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 EIF3LQ9Y262 564 aaKnown RBP18.44■□□□□ 0.54
PDLIM4-205ENST00000463615 ZNF469Q96JG9 3925 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 NPIPB9F8W1W9 429 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 C6orf47O95873 294 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 SERPINE1P05121 402 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 DHRS4L1P0CG22 281 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 CD99P14209 185 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 ADH6P28332 368 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 CCKARP32238 428 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 UGT2B10P36537 528 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 EIF1P41567 113 aaKnown RBP18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 ZNF41P51814 821 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 SUMO3P55854 103 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 ZNF844Q08AG5 666 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 SGCBQ16585 318 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 DEFB113Q30KQ7 82 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 KLHL26Q53HC5 615 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 TNFAIP8L3Q5GJ75 292 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 GATSQ8NAP1 163 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 ZNF527Q8NB42 609 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 OR10D3Q8NH80 312 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 ADAMTS15Q8TE58 950 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 OTUB1Q96FW1 271 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 GMPPAQ96IJ6 420 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 WFIKKN1Q96NZ8 548 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 NPAS1Q99742 590 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 DUSP26Q9BV47 211 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 OPN3Q9H1Y3 402 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 PLSCR4Q9NRQ2 329 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 GLRX2Q9NS18 164 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 HAO1Q9UJM8 370 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 FAF1Q9UNN5 650 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 SNX8Q9Y5X2 465 aa18.43■□□□□ 0.54
PDLIM4-205ENST00000463615 ZFHX3Q15911 3703 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 NUP214P35658 2090 aaPredicted RBP18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 EIF1AYO14602 144 aaKnown RBP18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 SS18L1O75177 396 aaPredicted RBP18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 G6PDP11413 515 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 NID1P14543 1247 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 CRYGSP22914 178 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 ELK4P28324 431 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 EIF1AXP47813 144 aaKnown RBP18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 SIRPAP78324 504 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 DCST2Q5T1A1 773 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 BHLHB9Q6PI77 547 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 LRRC34Q8IZ02 419 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 KIRREL3Q8IZU9 778 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 OR6K3Q8NGY3 331 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 OR2V1Q8NHB1 315 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 RNF145Q96MT1 663 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 ZNF226Q9NYT6 803 aa18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 NOP53Q9NZM5 478 aaKnown RBP18.42■□□□□ 0.54
PDLIM4-205ENST00000463615 MCTS1Q9ULC4 181 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms