RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 NR2F6P10588 404 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 LIPCP11150 499 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 FGF5P12034 268 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 FOLR1P15328 257 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 CERS1P27544 350 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 PRKAR1BP31321 381 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 IFNGR2P38484 337 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ETV6P41212 452 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 CDK5Q00535 292 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF45Q02386 682 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ACY1Q03154 408 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 PRKCDQ05655 676 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 CLN3Q13286 438 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 LASP1Q14847 261 aaKnown RBP9.2□□□□□ -0.94
PTPRD-207ENST00000463477 TRIM16LQ309B1 348 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 HEPHL1Q6MZM0 1159 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 VN1R4Q7Z5H5 301 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ASPGQ86U10 573 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ZBTB46Q86UZ6 589 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ATCAYQ86WG3 371 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 RBM45Q8IUH3 476 aaKnown RBP9.2□□□□□ -0.94
PTPRD-207ENST00000463477 NUP43Q8NFH3 380 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 PROKR2Q8NFJ6 384 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 FLVCR1-AS1Q8TAF5 88 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 PMEPA1Q969W9 287 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 TMEM80Q96HE8 168 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 C10orf90Q96M02 699 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 OR2A14Q96R47 310 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 OR7D2Q96RA2 312 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 OR6C1Q96RD1 312 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ACTRT3Q9BYD9 372 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 SLC38A1Q9H2H9 487 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ZBTB20Q9HC78 741 aaPredicted RBP9.2□□□□□ -0.94
PTPRD-207ENST00000463477 APMAPQ9HDC9 416 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 PDE7BQ9NP56 450 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 RHBDL2Q9NX52 303 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ACTR10Q9NZ32 417 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 PILRAQ9UKJ1 303 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 CFL2Q9Y281 166 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF780BQ9Y6R6 833 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 URADA6NGE7 173 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 AGAP5A6NIR3 686 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ISM1B1AKI9 464 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 FAM227AF5H4B4 570 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 M0R3H8 397 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 DSCR3O14972 297 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ALPPP05187 535 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 CDH3P22223 829 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 MMP11P24347 488 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 POU1F1P28069 291 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 GRK5P34947 590 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 BUD31P41223 144 aaPredicted RBP9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ARL4DP49703 201 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 UCNP55089 124 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 TNFRSF17Q02223 184 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 DUSP2Q05923 314 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 PIN1Q13526 163 aaPredicted RBP9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ATAD3BQ5T9A4 648 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 C18orf63Q68DL7 685 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 CDC73Q6P1J9 531 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 BTLAQ7Z6A9 289 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ZER1Q7Z7L7 766 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 COMTD1Q86VU5 262 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 PPP1R3BQ86XI6 285 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 CCDC116Q8IYX3 515 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 NLGN4XQ8N0W4 816 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 GALNT6Q8NCL4 622 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 OR4K5Q8NGD3 323 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 OR6T1Q8NGN1 323 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 GNPDA2Q8TDQ7 276 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 ITPKCQ96DU7 683 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 GIMAP5Q96F15 307 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 SERINC2Q96SA4 455 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 CTRCQ99895 268 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 WFDC6Q9BQY6 131 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 MND1Q9BWT6 205 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 CDADC1Q9BWV3 514 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 POLR2J2Q9GZM3 115 aaKnown RBP9.2□□□□□ -0.94
PTPRD-207ENST00000463477 CHRNA10Q9GZZ6 450 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 FGF21Q9NSA1 209 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 FBXW2Q9UKT8 454 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 TMEM184BQ9Y519 407 aaPredicted RBP9.2□□□□□ -0.94
PTPRD-207ENST00000463477 PEX16Q9Y5Y5 336 aa9.2□□□□□ -0.94
PTPRD-207ENST00000463477 CHD6Q8TD26 2715 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 A0A075B6Q4 140 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 SLC9B1P1A6NJY1 282 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 H3BN98 237 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 SEC16AO15027 2179 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 PRKRAO75569 313 aaKnown RBP9.19□□□□□ -0.94
PTPRD-207ENST00000463477 HNRNPCP07910 306 aaKnown RBP eCLIP9.19□□□□□ -0.94
PTPRD-207ENST00000463477 SLC35G6P0C7Q6 338 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 DBTP11182 482 aaKnown RBP9.19□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF10P21506 573 aaPredicted RBP9.19□□□□□ -0.94
PTPRD-207ENST00000463477 IFNA8P32881 189 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 GIPRP48546 466 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 CD97P48960 835 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 PCYT1AP49585 367 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 SMSP52788 366 aa9.19□□□□□ -0.94
PTPRD-207ENST00000463477 ZNF91Q05481 1191 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms