RNA–Protein interactions for RNA: ENST00000462733.5

ATPAF2-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 1 (best)

Gene ATPAF2, Length 1,737 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-202ENST00000462733 UMODP07911 640 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 MPIP34949 423 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 FRKP42685 505 aaPredicted RBP16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 CDC42P60953 191 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 VBP1P61758 197 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 IGLV3-21P80748 117 aaPredicted RBP16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 SERTAD2Q14140 314 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 OXA1LQ15070 435 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 LTB4RQ15722 352 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 TUBA3EQ6PEY2 450 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 SUN3Q8TAQ9 357 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 METTL21AQ8WXB1 218 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 UBE2FQ969M7 185 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 ZBED6CLQ96FA7 236 aaPredicted RBP16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 AMDHD1Q96NU7 426 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 DGAT2Q96PD7 388 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 ALPK1Q96QP1 1244 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 MESP1Q9BRJ9 268 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 GPR87Q9BY21 358 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 SLIRPQ9GZT3 109 aaKnown RBP16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 PNO1Q9NRX1 252 aaKnown RBP16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 SH3GLB1Q9Y371 365 aa16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 MRPS18BQ9Y676 258 aaKnown RBP16.73■□□□□ 0.27
ATPAF2-202ENST00000462733 C5orf58C9J3I9 102 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 TERTO14746 1132 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 OXSR1O95747 527 aaPredicted RBP16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 SLC35E2P0CK97 266 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 NT5EP21589 574 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 NCS1P62166 190 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 ATP1A4Q13733 1029 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 IRF3Q14653 427 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 CEBPEQ15744 281 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 ZNF367Q7RTV3 350 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 ZBTB46Q86UZ6 589 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 VASH2Q86V25 355 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 KBTBD8Q8NFY9 601 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 OR9A2Q8NGT5 310 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 PSMA8Q8TAA3 256 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 RNF217Q8TC41 542 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 SNRNP27Q8WVK2 155 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 APOBEC4Q8WW27 367 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 RASSF5Q8WWW0 418 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 GGHQ92820 318 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 KIAA1143Q96AT1 154 aaPredicted RBP16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 RBM18Q96H35 190 aaKnown RBP16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 MMP27Q9H306 513 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 CXorf36Q9H7Y0 433 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 ZNF226Q9NYT6 803 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 IL17BQ9UHF5 180 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 PMF1-BGLAPU3KQ54 211 aa16.72■□□□□ 0.27
ATPAF2-202ENST00000462733 TCRBV16S1A1N1A0A5B0 115 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 ADAP00813 363 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 TNNI3P19429 210 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 TNFRSF1BP20333 461 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 GPC1P35052 558 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 OR1E2P47887 323 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 CLK1P49759 484 aaKnown RBP16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 MLC1Q15049 377 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 TIGD6Q17RP2 521 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 DGAT2L6Q6ZPD8 337 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 USP43Q70EL4 1123 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 SLC46A3Q7Z3Q1 461 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 CCDC103Q8IW40 242 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 OR5AK3PQ8NH89 298 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 FGF11Q92914 225 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 C8orf44Q96CB5 159 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 ITPKCQ96DU7 683 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 NIPSNAP1Q9BPW8 284 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 ACSS1Q9NUB1 689 aaPredicted RBP16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 RLIMQ9NVW2 624 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 CCDC59Q9P031 241 aaKnown RBP16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 DAPK2Q9UIK4 370 aa16.71■□□□□ 0.27
ATPAF2-202ENST00000462733 NCOR2Q9Y618 2525 aa16.71■□□□□ 0.26
ATPAF2-202ENST00000462733 IGHV3-20A0A0C4DH32 117 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 ZAR1LA6NP61 321 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 AIREO43918 545 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 PIPP12273 146 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 BMP4P12644 408 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 LIFP15018 202 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 CD40LGP29965 261 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 INAQ16352 499 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 COLEC12Q5KU26 742 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 ANKRD37Q7Z713 158 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 SLC44A2Q8IWA5 706 aaPredicted RBP16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 KAT2AQ92830 837 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 DHRS1Q96LJ7 313 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 CDCA4Q9BXL8 241 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 DCSTAMPQ9H295 470 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 SEMA3GQ9NS98 782 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 CACNA1AO00555 2505 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 M0R082 166 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 ATP1B1P05026 303 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 OTX2P32243 289 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 LIPAP38571 399 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 IDH2P48735 452 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 SMIM11AP58511 58 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 SRSF6Q13247 344 aaKnown RBP16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 CLN3Q13286 438 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 BIKQ13323 160 aa16.7■□□□□ 0.26
ATPAF2-202ENST00000462733 ZNF770Q6IQ21 691 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms