RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 MED11Q9P086 117 aa10.75□□□□□ -0.69
CPNE1-221ENST00000462352 SUCOQ9UBS9 1254 aaKnown RBP10.75□□□□□ -0.69
CPNE1-221ENST00000462352 FBXL2Q9UKC9 423 aa10.75□□□□□ -0.69
CPNE1-221ENST00000462352 NPIPA1Q9UND3 350 aa10.75□□□□□ -0.69
CPNE1-221ENST00000462352 L3MBTL1Q9Y468 752 aa10.75□□□□□ -0.69
CPNE1-221ENST00000462352 ZNF462Q96JM2 2506 aa10.75□□□□□ -0.69
CPNE1-221ENST00000462352 IGLV3-32A0A0A0MS00 114 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 AGAP5A6NIR3 686 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 CCT8L1PA6NM43 557 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 NME4O00746 187 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 DBIP07108 87 aaKnown RBP10.74□□□□□ -0.69
CPNE1-221ENST00000462352 CELA3AP09093 270 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 T-ENOLP0DO92 83 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 RPS4Y1P22090 263 aaKnown RBP10.74□□□□□ -0.69
CPNE1-221ENST00000462352 CALB2P22676 271 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 GDF1P27539 372 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 ADH7P40394 386 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 MNAT1P51948 309 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 SLC25A3Q00325 362 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 ZNF117Q03924 483 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 FGFBP1Q14512 234 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 VMACQ2NL98 169 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 CMPK2Q5EBM0 449 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 BNC2Q6ZN30 1099 aaPredicted RBP10.74□□□□□ -0.69
CPNE1-221ENST00000462352 PEX5LQ8IYB4 626 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 FADS6Q8N9I5 356 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 HIPK4Q8NE63 616 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 OR2M3Q8NG83 312 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 OR4K17Q8NGC6 315 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 WDR60Q8WVS4 1066 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 SH3YL1Q96HL8 342 aaPredicted RBP10.74□□□□□ -0.69
CPNE1-221ENST00000462352 REXO5Q96IC2 774 aaKnown RBP10.74□□□□□ -0.69
CPNE1-221ENST00000462352 GPR137Q96N19 417 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 SPATA9Q9BWV2 254 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 DEFB127Q9H1M4 99 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 DSN1Q9H410 356 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 HHATLQ9HCP6 504 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 QPCTLQ9NXS2 382 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 ABCD2Q9UBJ2 740 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 USP22Q9UPT9 525 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 ANGPT4Q9Y264 503 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 AP3M1Q9Y2T2 418 aa10.74□□□□□ -0.69
CPNE1-221ENST00000462352 CLDN24A6NM45 220 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 FAM220BPB1ANY3 271 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 B2RBV5 119 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 GTPBP1O00178 669 aaKnown RBP10.73□□□□□ -0.69
CPNE1-221ENST00000462352 OIP5O43482 229 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 HCRTR2O43614 444 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 GMFGO60234 142 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 CDC40O60508 579 aaKnown RBP eCLIP10.73□□□□□ -0.69
CPNE1-221ENST00000462352 EIF4E2O60573 245 aaKnown RBP10.73□□□□□ -0.69
CPNE1-221ENST00000462352 UBOX5O94941 541 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 CSTAP01040 98 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 HPNP05981 417 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 UBL4AP11441 157 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 ETS2P15036 469 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 IL7RP16871 459 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 ENDOUP21128 410 aaKnown RBP10.73□□□□□ -0.69
CPNE1-221ENST00000462352 MSX1P28360 303 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 AQP1P29972 269 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 PCGF2P35227 344 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 KCNJ10P78508 379 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 MXRA7P84157 204 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 LIPEQ05469 1076 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 SLC10A1Q14973 349 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 NDUFAF6Q330K2 333 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 KRTCAP3Q53RY4 240 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 CBLN3Q6UW01 205 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 C16orf89Q6UX73 402 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 EIF3MQ7L2H7 374 aaKnown RBP10.73□□□□□ -0.69
CPNE1-221ENST00000462352 IFNEQ86WN2 208 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 VRK2Q86Y07 508 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 SLC30A8Q8IWU4 369 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 PGAM4Q8N0Y7 254 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 OR2T12Q8NG77 320 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 OR52P1PQ8NH57 321 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 B4GALNT2Q8NHY0 566 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 MIB2Q96AX9 1013 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 PTGES2Q9H7Z7 377 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 SPAG4Q9NPE6 437 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.73□□□□□ -0.69
CPNE1-221ENST00000462352 NDE1Q9NXR1 346 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 TMEM181Q9P2C4 612 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 GMPR2Q9P2T1 348 aaKnown RBP10.73□□□□□ -0.69
CPNE1-221ENST00000462352 SLC35A3Q9Y2D2 325 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 CARD8Q9Y2G2 431 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 LIPGQ9Y5X9 500 aa10.73□□□□□ -0.69
CPNE1-221ENST00000462352 GPC6Q9Y625 555 aaPredicted RBP10.73□□□□□ -0.69
CPNE1-221ENST00000462352 ELOVL7A1L3X0 281 aa10.72□□□□□ -0.69
CPNE1-221ENST00000462352 ZNF264O43296 627 aa10.72□□□□□ -0.69
CPNE1-221ENST00000462352 BCAS1O75363 584 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-221ENST00000462352 GCM2O75603 506 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-221ENST00000462352 TRAPPC6AO75865 159 aa10.72□□□□□ -0.69
CPNE1-221ENST00000462352 PDE9AO76083 593 aa10.72□□□□□ -0.69
CPNE1-221ENST00000462352 IGHG3P01860 377 aa10.72□□□□□ -0.69
CPNE1-221ENST00000462352 THBS1P07996 1170 aa10.72□□□□□ -0.69
CPNE1-221ENST00000462352 PABPC4LP0CB38 370 aaKnown RBP10.72□□□□□ -0.69
CPNE1-221ENST00000462352 UBTFL6P0CB48 400 aaPredicted RBP10.72□□□□□ -0.69
CPNE1-221ENST00000462352 EDN3P14138 238 aa10.72□□□□□ -0.69
CPNE1-221ENST00000462352 NID1P14543 1247 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms