RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 CDONQ4KMG0 1287 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 TCEAL5Q5H9L2 206 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 CEACAM19Q7Z692 300 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 C17orf47Q8NEP4 570 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 GANCQ8TET4 914 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 SMAP2Q8WU79 429 aaPredicted RBP17.18■□□□□ 0.34
HPS3-204ENST00000462030 KAT2AQ92830 837 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 YIPF5Q969M3 257 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 SORCS2Q96PQ0 1159 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 OR2M2Q96R28 347 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 LGR4Q9BXB1 951 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 DPH1Q9BZG8 443 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 OR52D1Q9H346 318 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 MDC1Q14676 2089 aaKnown RBP17.18■□□□□ 0.34
HPS3-204ENST00000462030 A0A0B4J203 849 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 EMC8O43402 210 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 MRPL3P09001 348 aaKnown RBP17.18■□□□□ 0.34
HPS3-204ENST00000462030 F8A1P23610 371 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 ST8SIA6P61647 398 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 PRR5P85299 388 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 SHC2P98077 582 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 AGERQ15109 404 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 LGALSLQ3ZCW2 172 aaPredicted RBP17.18■□□□□ 0.34
HPS3-204ENST00000462030 KLHL12Q53G59 568 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 RPTNQ6XPR3 784 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 MEPCEQ7L2J0 689 aaKnown RBP17.18■□□□□ 0.34
HPS3-204ENST00000462030 LUZP2Q86TE4 346 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 GID4Q8IVV7 300 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 TOMM5Q8N4H5 51 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 ACOT4Q8N9L9 421 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 KISS1RQ969F8 398 aaPredicted RBP17.18■□□□□ 0.34
HPS3-204ENST00000462030 AHCYL2Q96HN2 611 aaKnown RBP17.18■□□□□ 0.34
HPS3-204ENST00000462030 CDCP1Q9H5V8 836 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 C6orf106Q9H6K1 298 aaPredicted RBP17.18■□□□□ 0.34
HPS3-204ENST00000462030 EVA1BQ9NVM1 165 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 KLHL28Q9NXS3 571 aa17.18■□□□□ 0.34
HPS3-204ENST00000462030 NOTCH4Q99466 2003 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 MPC2O95563 127 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 HIST1H1TP22492 207 aaPredicted RBP17.17■□□□□ 0.34
HPS3-204ENST00000462030 PRKACBP22694 351 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 CERS1P27544 350 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 PRKAR1BP31321 381 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 CLCNKAP51800 687 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 ST3GAL2Q16842 350 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 ZNF687Q8N1G0 1237 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 OR13C5Q8NGS8 318 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 NXPE3Q969Y0 559 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 ZSWIM3Q96MP5 696 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 ZMIZ1Q9ULJ6 1067 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 TMEM5Q9Y2B1 443 aa17.17■□□□□ 0.34
HPS3-204ENST00000462030 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.17■□□□□ 0.34
HPS3-204ENST00000462030 RPS10-NUDT3A0A1W2PQS6 291 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 RPN2P04844 631 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 CISD3P0C7P0 127 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 ACVR1BP36896 505 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 ZNF81P51508 661 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 EXOSC2Q13868 293 aaKnown RBP17.16■□□□□ 0.34
HPS3-204ENST00000462030 GALEQ14376 348 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 COL28A1Q2UY09 1125 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 METRNLQ641Q3 311 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 ESPNLQ6ZVH7 1005 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 ADGRD2Q7Z7M1 963 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 FBXL6Q8N531 539 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 OR4D9Q8NGE8 314 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 ABHD4Q8TB40 342 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 DACT3Q96B18 629 aaPredicted RBP17.16■□□□□ 0.34
HPS3-204ENST00000462030 MS4A6EQ96DS6 147 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 ELP4Q96EB1 424 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 ZFP3Q96NJ6 502 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 CACNG6Q9BXT2 260 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 PITHD1Q9GZP4 211 aaPredicted RBP17.16■□□□□ 0.34
HPS3-204ENST00000462030 BEX1Q9HBH7 125 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 PRDM7Q9NQW5 492 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 NLGN3Q9NZ94 848 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 NUP50Q9UKX7 468 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 CES1P1Q9UKY3 287 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 MRPS7Q9Y2R9 242 aaKnown RBP17.16■□□□□ 0.34
HPS3-204ENST00000462030 TEX51A0A1B0GUA7 166 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 OR5F1O95221 314 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 CSNK2A2P19784 350 aaPredicted RBP17.16■□□□□ 0.34
HPS3-204ENST00000462030 HSD17B2P37059 387 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 CAMK2DQ13557 499 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 ARHGEF6Q15052 776 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 GSG1Q2KHT4 349 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 CCNJQ5T5M9 372 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 MTFR2Q6P444 385 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 LRRTM4Q86VH4 590 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 COMMD7Q86VX2 200 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 FANK1Q8TC84 345 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 GIMAP1Q8WWP7 306 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 SLC35A4Q96G79 324 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 COX14Q96I36 57 aa17.16■□□□□ 0.34
HPS3-204ENST00000462030 ZNF443Q9Y2A4 671 aaPredicted RBP17.16■□□□□ 0.34
HPS3-204ENST00000462030 MKI67P46013 3256 aaKnown RBP17.16■□□□□ 0.34
HPS3-204ENST00000462030 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.15■□□□□ 0.34
HPS3-204ENST00000462030 CENPVL1A0A0U1RR11 272 aa17.15■□□□□ 0.34
HPS3-204ENST00000462030 GPR171O14626 319 aa17.15■□□□□ 0.34
HPS3-204ENST00000462030 PCCBP05166 539 aa17.15■□□□□ 0.34
HPS3-204ENST00000462030 ANKRD34CP0C6C1 535 aa17.15■□□□□ 0.34
HPS3-204ENST00000462030 F3P13726 295 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms