RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 IL2RGP31785 369 aa2.54□□□□□ -2
RFC4-211ENST00000460408 RPL4P36578 427 aaKnown RBP2.54□□□□□ -2
RFC4-211ENST00000460408 KRT6CP48668 564 aa2.54□□□□□ -2
RFC4-211ENST00000460408 CXCL6P80162 114 aa2.54□□□□□ -2
RFC4-211ENST00000460408 IL18R1Q13478 541 aa2.54□□□□□ -2
RFC4-211ENST00000460408 DPYSL3Q14195 570 aa2.54□□□□□ -2
RFC4-211ENST00000460408 DCAF4L1Q3SXM0 396 aa2.54□□□□□ -2
RFC4-211ENST00000460408 ATAD3CQ5T2N8 411 aa2.54□□□□□ -2
RFC4-211ENST00000460408 CBLN3Q6UW01 205 aa2.54□□□□□ -2
RFC4-211ENST00000460408 PARGQ86W56 976 aa2.54□□□□□ -2
RFC4-211ENST00000460408 ERICH1Q86X53 443 aa2.54□□□□□ -2
RFC4-211ENST00000460408 CCDC110Q8TBZ0 833 aa2.54□□□□□ -2
RFC4-211ENST00000460408 MRAPQ8TCY5 172 aa2.54□□□□□ -2
RFC4-211ENST00000460408 ADAMTS16Q8TE57 1224 aa2.54□□□□□ -2
RFC4-211ENST00000460408 GIPC3Q8TF64 312 aa2.54□□□□□ -2
RFC4-211ENST00000460408 UPRTQ96BW1 309 aa2.54□□□□□ -2
RFC4-211ENST00000460408 TBC1D31Q96DN5 1066 aa2.54□□□□□ -2
RFC4-211ENST00000460408 TMEM121Q9BTD3 319 aa2.54□□□□□ -2
RFC4-211ENST00000460408 TBCDQ9BTW9 1192 aa2.54□□□□□ -2
RFC4-211ENST00000460408 TM2D1Q9BX74 207 aa2.54□□□□□ -2
RFC4-211ENST00000460408 SLC25A51Q9H1U9 297 aa2.54□□□□□ -2
RFC4-211ENST00000460408 COQ10BQ9H8M1 238 aa2.54□□□□□ -2
RFC4-211ENST00000460408 CALHM2Q9HA72 323 aa2.54□□□□□ -2
RFC4-211ENST00000460408 EXOSC3Q9NQT5 275 aaKnown RBP2.54□□□□□ -2
RFC4-211ENST00000460408 C1orf123Q9NWV4 160 aa2.54□□□□□ -2
RFC4-211ENST00000460408 GALPQ9UBC7 116 aa2.54□□□□□ -2
RFC4-211ENST00000460408 SLC2A6Q9UGQ3 507 aa2.54□□□□□ -2
RFC4-211ENST00000460408 RNF6Q9Y252 685 aa2.54□□□□□ -2
RFC4-211ENST00000460408 UBR1Q8IWV7 1749 aa2.54□□□□□ -2
RFC4-211ENST00000460408 SLIT2O94813 1529 aa2.53□□□□□ -2
RFC4-211ENST00000460408 SYCP2Q9BX26 1530 aa2.53□□□□□ -2
RFC4-211ENST00000460408 ADCY9O60503 1353 aa2.53□□□□□ -2
RFC4-211ENST00000460408 IGKV6D-41A0A0C4DH26 115 aa2.53□□□□□ -2
RFC4-211ENST00000460408 A0A1W2PNU3 283 aaPredicted RBP2.53□□□□□ -2
RFC4-211ENST00000460408 ESYT2A0FGR8 921 aa2.53□□□□□ -2
RFC4-211ENST00000460408 ZSCAN5BA6NJL1 495 aa2.53□□□□□ -2
RFC4-211ENST00000460408 EFCAB7A8K855 629 aa2.53□□□□□ -2
RFC4-211ENST00000460408 A8MX80 341 aa2.53□□□□□ -2
RFC4-211ENST00000460408 CDX4O14627 284 aaPredicted RBP2.53□□□□□ -2
RFC4-211ENST00000460408 PHOX2AO14813 284 aa2.53□□□□□ -2
RFC4-211ENST00000460408 LATO43561 262 aa2.53□□□□□ -2
RFC4-211ENST00000460408 SMPD2O60906 423 aa2.53□□□□□ -2
RFC4-211ENST00000460408 IFNB1P01574 187 aa2.53□□□□□ -2
RFC4-211ENST00000460408 IGFBP1P08833 259 aaPredicted RBP2.53□□□□□ -2
RFC4-211ENST00000460408 NCF1P14598 390 aaPredicted RBP2.53□□□□□ -2
RFC4-211ENST00000460408 UQCRBP14927 111 aa2.53□□□□□ -2
RFC4-211ENST00000460408 ACAA2P42765 397 aaKnown RBP2.53□□□□□ -2
RFC4-211ENST00000460408 TRPC1P48995 793 aa2.53□□□□□ -2
RFC4-211ENST00000460408 PLOD1Q02809 727 aaPredicted RBP2.53□□□□□ -2
RFC4-211ENST00000460408 TRIP10Q15642 601 aa2.53□□□□□ -2
RFC4-211ENST00000460408 CAMK4Q16566 473 aa2.53□□□□□ -2
RFC4-211ENST00000460408 TMEM41BQ5BJD5 291 aa2.53□□□□□ -2
RFC4-211ENST00000460408 ZNF311Q5JNZ3 666 aa2.53□□□□□ -2
RFC4-211ENST00000460408 FAM120AOSQ5T036 256 aa2.53□□□□□ -2
RFC4-211ENST00000460408 ZNF57Q68EA5 555 aaPredicted RBP2.53□□□□□ -2
RFC4-211ENST00000460408 UFSP1Q6NVU6 142 aa2.53□□□□□ -2
RFC4-211ENST00000460408 LRRC8BQ6P9F7 803 aa2.53□□□□□ -2
RFC4-211ENST00000460408 GET4Q7L5D6 327 aaPredicted RBP2.53□□□□□ -2
RFC4-211ENST00000460408 HSD11B1LQ7Z5J1 315 aa2.53□□□□□ -2
RFC4-211ENST00000460408 Q8N9G6 341 aaPredicted RBP2.53□□□□□ -2
RFC4-211ENST00000460408 RHOXF1Q8NHV9 184 aa2.53□□□□□ -2
RFC4-211ENST00000460408 NANPQ8TBE9 248 aa2.53□□□□□ -2
RFC4-211ENST00000460408 TFB1MQ8WVM0 346 aaKnown RBP2.53□□□□□ -2
RFC4-211ENST00000460408 PPP1R16AQ96I34 528 aa2.53□□□□□ -2
RFC4-211ENST00000460408 ELMO2Q96JJ3 720 aa2.53□□□□□ -2
RFC4-211ENST00000460408 CASD1Q96PB1 797 aa2.53□□□□□ -2
RFC4-211ENST00000460408 SIGLEC12Q96PQ1 595 aa2.53□□□□□ -2
RFC4-211ENST00000460408 VPS35Q96QK1 796 aa2.53□□□□□ -2
RFC4-211ENST00000460408 CCT8L2Q96SF2 557 aa2.53□□□□□ -2
RFC4-211ENST00000460408 GPA33Q99795 319 aa2.53□□□□□ -2
RFC4-211ENST00000460408 FEM1AQ9BSK4 669 aa2.53□□□□□ -2
RFC4-211ENST00000460408 COMMD4Q9H0A8 199 aa2.53□□□□□ -2
RFC4-211ENST00000460408 PNNQ9H307 717 aaKnown RBP2.53□□□□□ -2
RFC4-211ENST00000460408 IKZF5Q9H5V7 419 aa2.53□□□□□ -2
RFC4-211ENST00000460408 WDR76Q9H967 626 aa2.53□□□□□ -2
RFC4-211ENST00000460408 SLC7A10Q9NS82 523 aa2.53□□□□□ -2
RFC4-211ENST00000460408 RBM28Q9NW13 759 aaKnown RBP2.53□□□□□ -2
RFC4-211ENST00000460408 ELOVL2Q9NXB9 296 aa2.53□□□□□ -2
RFC4-211ENST00000460408 UTP6Q9NYH9 597 aaKnown RBP2.53□□□□□ -2
RFC4-211ENST00000460408 EHFQ9NZC4 300 aa2.53□□□□□ -2
RFC4-211ENST00000460408 Q9UF83 564 aa2.53□□□□□ -2
RFC4-211ENST00000460408 MFHAS1Q9Y4C4 1052 aa2.53□□□□□ -2
RFC4-211ENST00000460408 AP4B1Q9Y6B7 739 aa2.53□□□□□ -2
RFC4-211ENST00000460408 MARF1Q9Y4F3 1742 aaKnown RBP2.53□□□□□ -2
RFC4-211ENST00000460408 TMEM131LA2VDJ0 1609 aa2.53□□□□□ -2
RFC4-211ENST00000460408 TULP4Q9NRJ4 1543 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 MYOM2P54296 1465 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 CASZ1Q86V15 1759 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 A0A1B0GWJ7 208 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 EFNA2O43921 213 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 DUSP14O95147 198 aaKnown RBP2.52□□□□□ -2.01
RFC4-211ENST00000460408 OPN1LWP04000 364 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 H2AFZP0C0S5 128 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 ANXA3P12429 323 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 BCKDHAP12694 445 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 PGAM2P15259 253 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 IGHV1-2P23083 117 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 ACVR1BP36896 505 aa2.52□□□□□ -2.01
RFC4-211ENST00000460408 MDH2P40926 338 aaKnown RBP2.52□□□□□ -2.01
RFC4-211ENST00000460408 MAGEA9P43362 315 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms