RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 NEUROD4Q9HD90 331 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 MED17Q9NVC6 651 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 ATAD3AQ9NVI7 634 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 KLHL28Q9NXS3 571 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 EMC9Q9Y3B6 208 aa20.45■□□□□ 0.86
PTPN4-207ENST00000460162 C16orf97H3BN30 126 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 DIAPH2O60879 1101 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 LYPLA1O75608 230 aaPredicted RBP20.44■□□□□ 0.86
PTPN4-207ENST00000460162 HMGN2P05204 90 aaKnown RBP20.44■□□□□ 0.86
PTPN4-207ENST00000460162 PSMA4P25789 261 aaKnown RBP20.44■□□□□ 0.86
PTPN4-207ENST00000460162 VSNL1P62760 191 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 LASP1Q14847 261 aaKnown RBP20.44■□□□□ 0.86
PTPN4-207ENST00000460162 PTGR1Q14914 329 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 CTU2Q2VPK5 515 aaKnown RBP20.44■□□□□ 0.86
PTPN4-207ENST00000460162 KRTAP21-3Q3LHN1 58 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 OR7A2PQ8NGA2 310 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 OR6K3Q8NGY3 331 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 OR10D3Q8NH80 312 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 PSMA8Q8TAA3 256 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 CAVIN3Q969G5 261 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 OTUB1Q96FW1 271 aaPredicted RBP20.44■□□□□ 0.86
PTPN4-207ENST00000460162 GMPPAQ96IJ6 420 aaPredicted RBP20.44■□□□□ 0.86
PTPN4-207ENST00000460162 RNF145Q96MT1 663 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 PRRG4Q9BZD6 226 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 ROPN1BQ9BZX4 212 aaPredicted RBP20.44■□□□□ 0.86
PTPN4-207ENST00000460162 PIGUQ9H490 435 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 ROPN1Q9HAT0 212 aaPredicted RBP20.44■□□□□ 0.86
PTPN4-207ENST00000460162 C6orf203Q9P0P8 240 aaPredicted RBP20.44■□□□□ 0.86
PTPN4-207ENST00000460162 GIMAP2Q9UG22 337 aa20.44■□□□□ 0.86
PTPN4-207ENST00000460162 MCTS1Q9ULC4 181 aaKnown RBP20.44■□□□□ 0.86
PTPN4-207ENST00000460162 UQCRHLA0A096LP55 91 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 DEFB108AA8MXU0 73 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 SIAH2O43255 324 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 SS18L1O75177 396 aaPredicted RBP20.43■□□□□ 0.86
PTPN4-207ENST00000460162 PEX11AO75192 247 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 SPAG7O75391 227 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 KRT16P08779 473 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 ME2P23368 584 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 RAC1P63000 192 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 CD226Q15762 336 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 CCNJQ5T5M9 372 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 PPP4R4Q6NUP7 873 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 CDC73Q6P1J9 531 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 ESPNLQ6ZVH7 1005 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 OR56A1Q8NGH5 318 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 OR5P2Q8WZ92 322 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 SH3YL1Q96HL8 342 aaPredicted RBP20.43■□□□□ 0.86
PTPN4-207ENST00000460162 C1orf50Q9BV19 199 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 FBXO34Q9NWN3 711 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 SNX8Q9Y5X2 465 aa20.43■□□□□ 0.86
PTPN4-207ENST00000460162 ADAMDEC1O15204 470 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 SKAP2O75563 359 aaPredicted RBP20.42■□□□□ 0.86
PTPN4-207ENST00000460162 PLGP00747 810 aaPredicted RBP20.42■□□□□ 0.86
PTPN4-207ENST00000460162 LAMP1P11279 417 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 ATP6V1C1P21283 382 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 HOXC12P31275 282 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 ARRB2P32121 409 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 SLC6A8P48029 635 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 C6orf136Q5SQH8 315 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 CPTPQ5TA50 214 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 MTERF4Q7Z6M4 381 aaKnown RBP20.42■□□□□ 0.86
PTPN4-207ENST00000460162 ZNF610Q8N9Z0 462 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 FNDC5Q8NAU1 212 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 WFDC11Q8NEX6 87 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 OR2V1Q8NHB1 315 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 B4GALNT2Q8NHY0 566 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 CDS1Q92903 461 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 MOAP1Q96BY2 351 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 CHMP6Q96FZ7 201 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 NPAS1Q99742 590 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 ACTRT3Q9BYD9 372 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 GLRX2Q9NS18 164 aa20.42■□□□□ 0.86
PTPN4-207ENST00000460162 RAI1Q7Z5J4 1906 aaPredicted RBP20.41■□□□□ 0.86
PTPN4-207ENST00000460162 SOX30O94993 753 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 SYNGR4O95473 234 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 ELK4P28324 431 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 EIF1P41567 113 aaKnown RBP20.41■□□□□ 0.86
PTPN4-207ENST00000460162 CTBP2P56545 445 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 TP53BP2Q13625 1128 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 LSM12Q3MHD2 195 aaKnown RBP20.41■□□□□ 0.86
PTPN4-207ENST00000460162 PDSS1Q5T2R2 415 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 EMBQ6PCB8 327 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 ZNF527Q8NB42 609 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 SFXN5Q8TD22 340 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 AENQ8WTP8 325 aaKnown RBP20.41■□□□□ 0.86
PTPN4-207ENST00000460162 PIK3IP1Q96FE7 263 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 POM121Q96HA1 1249 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 C3orf30Q96M34 536 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 PRPF18Q99633 342 aaKnown RBP20.41■□□□□ 0.86
PTPN4-207ENST00000460162 PLSCR4Q9NRQ2 329 aa20.41■□□□□ 0.86
PTPN4-207ENST00000460162 CXCL13O43927 109 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 SLU7O95391 586 aaKnown RBP20.4■□□□□ 0.86
PTPN4-207ENST00000460162 BPGMP07738 259 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 LINGO3P0C6S8 592 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 PRPS1L1P21108 318 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 CCT3P49368 545 aaKnown RBP20.4■□□□□ 0.86
PTPN4-207ENST00000460162 SUMO3P55854 103 aaPredicted RBP20.4■□□□□ 0.86
PTPN4-207ENST00000460162 ZNF117Q03924 483 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 SPDYE7PQ495Y7 208 aa20.4■□□□□ 0.86
PTPN4-207ENST00000460162 DCST2Q5T1A1 773 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms