RNA–Protein interactions for RNA: ENST00000459667.1

VARS-218, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-218ENST00000459667 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.77■□□□□ 0.6
VARS-218ENST00000459667 ATAD3BQ5T9A4 648 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 ARSKQ6UWY0 536 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 MTERF4Q7Z6M4 381 aaKnown RBP18.77■□□□□ 0.6
VARS-218ENST00000459667 ZNF614Q8N883 585 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 OR5M1Q8NGP8 315 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 PHOSPHO1Q8TCT1 267 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 ZPLD1Q8TCW7 415 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 XAGE5Q8WWM1 108 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 TUBA1CQ9BQE3 449 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 PIGQQ9BRB3 760 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 UCK2Q9BZX2 261 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 NPHS2Q9NP85 383 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 VDAC3Q9Y277 283 aa18.77■□□□□ 0.6
VARS-218ENST00000459667 KIAA1549Q9HCM3 1950 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 FAM234BA2RU67 622 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 OR2M5A3KFT3 312 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 NKX2-6A6NCS4 301 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 CD8B2A6NJW9 211 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 HSPB2A8KAH6 182 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 NPIPB9F8W1W9 429 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 H3BNH8 94 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 HCRTR2O43614 444 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 STX11O75558 287 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 C1QCP02747 245 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 VIMP08670 466 aaKnown RBP18.76■□□□□ 0.59
VARS-218ENST00000459667 POU3F2P20265 443 aaPredicted RBP18.76■□□□□ 0.59
VARS-218ENST00000459667 TIMP3P35625 211 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 MRPL19P49406 292 aaKnown RBP18.76■□□□□ 0.59
VARS-218ENST00000459667 RNF144AP50876 292 aaPredicted RBP18.76■□□□□ 0.59
VARS-218ENST00000459667 GPR68Q15743 365 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 HSPB2Q16082 182 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 KLHL26Q53HC5 615 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 HEPHL1Q6MZM0 1159 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 DNAJC14Q6Y2X3 702 aaPredicted RBP18.76■□□□□ 0.59
VARS-218ENST00000459667 MSANTD1Q6ZTZ1 278 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 RNF130Q86XS8 419 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 TNIP2Q8NFZ5 429 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 B4GALNT2Q8NHY0 566 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 RAB8BQ92930 207 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 THOC1Q96FV9 657 aaKnown RBP18.76■□□□□ 0.59
VARS-218ENST00000459667 NMUR2Q9GZQ4 415 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 ZNF350Q9GZX5 532 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 RMND5AQ9H871 391 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 CALHM2Q9HA72 323 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 DCTN4Q9UJW0 460 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 TRIM33Q9UPN9 1127 aa18.76■□□□□ 0.59
VARS-218ENST00000459667 MBD3L4A6NDZ8 208 aaPredicted RBP18.75■□□□□ 0.59
VARS-218ENST00000459667 MBD3L3A6NE82 208 aaPredicted RBP18.75■□□□□ 0.59
VARS-218ENST00000459667 MBD3L5A6NJ08 208 aaPredicted RBP18.75■□□□□ 0.59
VARS-218ENST00000459667 LINC01387J3KSC0 135 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 DYNC1I1O14576 645 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 HNRNPRO43390 633 aaKnown RBP18.75■□□□□ 0.59
VARS-218ENST00000459667 FCMRO60667 390 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 IL2RAP01589 272 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 PEPDP12955 493 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 ZNF41P51814 821 aaPredicted RBP18.75■□□□□ 0.59
VARS-218ENST00000459667 GUCY1A3Q02108 690 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 ZNF117Q03924 483 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 BCL2A1Q16548 175 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 OLIG3Q7RTU3 272 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 UBQLNLQ8IYU4 475 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 NAXEQ8NCW5 288 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 MBD3L2Q8NHZ7 208 aaPredicted RBP18.75■□□□□ 0.59
VARS-218ENST00000459667 VPS33AQ96AX1 596 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 KCNJ16Q9NPI9 418 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 MKLN1Q9UL63 735 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 ZNF337Q9Y3M9 751 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 DTNAQ9Y4J8 743 aa18.75■□□□□ 0.59
VARS-218ENST00000459667 A0A087WZY1 265 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 A0A0G2JND7 137 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 CLCA1A8K7I4 914 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 SHISA8B8ZZ34 492 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 H3BML4 177 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 TNFRSF21O75509 655 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 ANP32DO95626 131 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 COX6B1P14854 86 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 CEACAM8P31997 349 aaPredicted RBP18.74■□□□□ 0.59
VARS-218ENST00000459667 ANXA11P50995 505 aaKnown RBP18.74■□□□□ 0.59
VARS-218ENST00000459667 FUT5Q11128 374 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 PDZK1Q5T2W1 519 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 ADGRE4PQ86SQ3 457 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 LIX1LQ8IVB5 337 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 MEIOBQ8N635 442 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 PNPT1Q8TCS8 783 aaKnown RBP18.74■□□□□ 0.59
VARS-218ENST00000459667 MARVELD3Q96A59 401 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 ZBTB8AQ96BR9 441 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 ROPN1LQ96C74 230 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 ITCHQ96J02 903 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 RABEP2Q9H5N1 569 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 CCDC134Q9H6E4 229 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 MED17Q9NVC6 651 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 UNC79Q9P2D8 2635 aa18.74■□□□□ 0.59
VARS-218ENST00000459667 GTPBP1O00178 669 aaKnown RBP18.73■□□□□ 0.59
VARS-218ENST00000459667 HMGN4O00479 90 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 OIP5O43482 229 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 KRT75O95678 551 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 SNRPB2P08579 225 aaKnown RBP18.73■□□□□ 0.59
VARS-218ENST00000459667 ZNF17P17021 662 aa18.73■□□□□ 0.59
VARS-218ENST00000459667 MDH1P40925 334 aaKnown RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms