RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 SLC38A1Q9H2H9 487 aa9.15□□□□□ -0.94
ATG4A-206ENST00000457035 DSN1Q9H410 356 aa9.15□□□□□ -0.94
ATG4A-206ENST00000457035 RAD21L1Q9H4I0 556 aa9.15□□□□□ -0.94
ATG4A-206ENST00000457035 POLE3Q9NRF9 147 aa9.15□□□□□ -0.94
ATG4A-206ENST00000457035 SDHAF3Q9NRP4 125 aa9.15□□□□□ -0.94
ATG4A-206ENST00000457035 THUMPD1Q9NXG2 353 aaKnown RBP9.15□□□□□ -0.94
ATG4A-206ENST00000457035 MED11Q9P086 117 aa9.15□□□□□ -0.94
ATG4A-206ENST00000457035 ZNF835Q9Y2P0 537 aa9.15□□□□□ -0.94
ATG4A-206ENST00000457035 ARL2BPQ9Y2Y0 163 aa9.15□□□□□ -0.94
ATG4A-206ENST00000457035 MRPS18CQ9Y3D5 142 aaKnown RBP9.15□□□□□ -0.94
ATG4A-206ENST00000457035 WDR45Q9Y484 360 aa9.15□□□□□ -0.94
ATG4A-206ENST00000457035 DTNAQ9Y4J8 743 aa9.15□□□□□ -0.94
ATG4A-206ENST00000457035 LIPGQ9Y5X9 500 aa9.15□□□□□ -0.94
ATG4A-206ENST00000457035 ICE1Q9Y2F5 2266 aa9.15□□□□□ -0.95
ATG4A-206ENST00000457035 DOCK7Q96N67 2140 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 CENPVL1A0A0U1RR11 272 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 BBIP1A8MTZ0 92 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 EVPLLA8MZ36 301 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 J3QL48 77 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 FXYD1O00168 92 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 SCDO00767 359 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 NDUFB5O43674 189 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 KIAA0513O60268 411 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 SUSD5O60279 629 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 HCN1O60741 890 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 TRAPPC6AO75865 159 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 NPPAP01160 153 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 NR2F1P10589 423 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 COX4I1P13073 169 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 GP1BBP13224 206 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 HPGDP15428 266 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 PPIBP23284 216 aaKnown RBP9.14□□□□□ -0.95
ATG4A-206ENST00000457035 GDF1P27539 372 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 ADH7P40394 386 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 DSTNP60981 165 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 NFYCQ13952 458 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 SELPLGQ14242 412 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 CD226Q15762 336 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 ADRM1Q16186 407 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 MMEL1Q495T6 779 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 GPAT3Q53EU6 434 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 EIPR1Q53HC9 387 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 REP15Q6BDI9 236 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 NANOGP8Q6NSW7 305 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 Q6ZPB1 254 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-206ENST00000457035 MTERF4Q7Z6M4 381 aaKnown RBP9.14□□□□□ -0.95
ATG4A-206ENST00000457035 SPPL2CQ8IUH8 684 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 FAM26EQ8N5C1 309 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 OR2M3Q8NG83 312 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 PMM1Q92871 262 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 LRRC58Q96CX6 371 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 RUBCNLQ9H714 662 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 MTHFD2LQ9H903 347 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-206ENST00000457035 NANOGQ9H9S0 305 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 PPP4R1LQ9P1A2 415 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 B4GALT7Q9UBV7 327 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 LRRK2Q5S007 2527 aa9.14□□□□□ -0.95
ATG4A-206ENST00000457035 NCOA6Q14686 2063 aaPredicted RBP9.14□□□□□ -0.95
ATG4A-206ENST00000457035 TRGV5A0A0B4J1U4 118 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 SERINC4A6NH21 518 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 AGAP5A6NIR3 686 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 AQP7O14520 342 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 MRASO14807 208 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 ST8SIA5O15466 376 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 OIP5O43482 229 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 CDC40O60508 579 aaKnown RBP eCLIP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 STSP08842 583 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 ENDOUP21128 410 aaKnown RBP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 RPS4Y1P22090 263 aaKnown RBP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 DPP4P27487 766 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 MSX1P28360 303 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 SRD5A2P31213 254 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 GZMMP51124 257 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 CAPRIN1Q14444 709 aaKnown RBP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 TRMT5Q32P41 509 aaKnown RBP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 PDZK1Q5T2W1 519 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 ARHGAP11AQ6P4F7 1023 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 CBLN3Q6UW01 205 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 YRDCQ86U90 279 aaKnown RBP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 MISPQ8IVT2 679 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF619Q8N2I2 560 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 GATSQ8NAP1 163 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 ZNF527Q8NB42 609 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 FAM83FQ8NEG4 500 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 NEIL3Q8TAT5 605 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 PHOSPHO1Q8TCT1 267 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 OIT3Q8WWZ8 545 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 MAL2Q969L2 176 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 TMEM19Q96HH6 336 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 TREX2Q9BQ50 279 aaPredicted RBP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 KLHDC3Q9BQ90 382 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 SLC39A3Q9BRY0 314 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 THUMPD3Q9BV44 507 aaKnown RBP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 TRIM8Q9BZR9 551 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 OR2B2Q9GZK3 357 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 QRSL1Q9H0R6 528 aaKnown RBP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 SLC6A15Q9H2J7 730 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 LDAHQ9H6V9 325 aa9.13□□□□□ -0.95
ATG4A-206ENST00000457035 KAT8Q9H7Z6 458 aaKnown RBP9.13□□□□□ -0.95
ATG4A-206ENST00000457035 BCL2L10Q9HD36 194 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms