RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 CSTF3Q12996 717 aaKnown RBP4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 SP140Q13342 867 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 ADAM15Q13444 863 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 NR0B2Q15466 257 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF124Q15973 351 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 DUSP5Q16690 384 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 C21orf62-AS1Q17RA5 79 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF57Q68EA5 555 aaPredicted RBP4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 GDF6Q6KF10 455 aaPredicted RBP4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 CXorf57Q6NSI4 855 aaKnown RBP4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 GDPGP1Q6ZNW5 385 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 NKAIN4Q8IVV8 208 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 RGP1Q92546 391 aaPredicted RBP4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 ECHDC3Q96DC8 303 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 MGME1Q9BQP7 344 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 SCRT1Q9BWW7 348 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 MED28Q9H204 178 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 SEMA6CQ9H3T2 930 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 RC3H2Q9HBD1 1191 aaKnown RBP4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 LHX9Q9NQ69 397 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 FLRT1Q9NZU1 646 aa4.23□□□□□ -1.73
DEPDC1-202ENST00000456315 ATRXP46100 2492 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF469Q96JG9 3925 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 TRBC2A0A5B9 178 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 RNF222A6NCQ9 220 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 PYCARD-AS1I3L0S3 204 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CASC3O15234 703 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 NDUFS3O75489 264 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 C6orf47O95873 294 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 IFNA16P05015 189 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 GYPBP06028 91 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OR8U8P0C7N1 319 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 NPR2P20594 1047 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CALCRP30988 508 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 TRIM23P36406 574 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 MAPK9P45984 424 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 TAF6P49848 677 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CCR8P51685 355 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 XKP51811 444 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 PNLIPRP1P54315 467 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 FKBP1AP62942 108 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OLR1P78380 273 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 MST1LQ2TV78 715 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 MARCH9Q86YJ5 346 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SEMA6DQ8NFY4 1073 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OR52I2Q8NH67 350 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SORCS1Q8WY21 1168 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 MRGPRFQ96AM1 343 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CREB3L1Q96BA8 519 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ARMC5Q96C12 935 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OR51B5Q9H339 312 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 NLE1Q9NVX2 485 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 HPF1Q9NWY4 346 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 PIN4Q9Y237 131 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 STON1Q9Y6Q2 735 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 NUP210Q8TEM1 1887 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 PI4KAP42356 2102 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 TSPAN11A1L157 253 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 LRIT2A6NDA9 550 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 H0YC42 278 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 AIPO00170 330 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SCAMP1O15126 338 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 FZD7O75084 574 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 GADD45GO95257 159 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 GJB5O95377 273 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CKBP12277 381 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 WDR5P61964 334 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 RBM39Q14498 530 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 CDKL4Q5MAI5 379 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ZDHHC20Q5W0Z9 365 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC44A3Q8N4M1 653 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 KLHL36Q8N4N3 616 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SRFBP1Q8NEF9 429 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OR51L1Q8NGJ5 315 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 GNPDA2Q8TDQ7 276 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ADAMTS19Q8TE59 1207 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ZNF524Q96C55 264 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 PPP3R2Q96LZ3 170 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 TEAD3Q99594 435 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 KLHDC3Q9BQ90 382 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 RSRP1Q9BUV0 290 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 POLR2J3Q9H1A7 115 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 C6orf106Q9H6K1 298 aaPredicted RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 SLC6A20Q9NP91 592 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 NCKAP1Q9Y2A7 1128 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 PPP2R3BQ9Y5P8 575 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ITPR1Q14643 2758 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 A0A1B0GV90 55 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 A0A1W2PRG6 482 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 WIPF3A6NGB9 483 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 PRSS44E7EML9 344 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 OTCP00480 354 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 TFP02787 698 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 FABP1P07148 127 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ANXA2P07355 339 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 ANXA8P13928 327 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 WARSP23381 471 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 RPS27P42677 84 aaKnown RBP4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 RPIAP49247 311 aa4.22□□□□□ -1.73
DEPDC1-202ENST00000456315 RNF144AP50876 292 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms