RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 ADPRHL2Q9NX46 363 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 VNN3Q9NY84 501 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 RPS6KA6Q9UK32 745 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 SAMD4AQ9UPU9 718 aaKnown RBP10.07□□□□□ -0.8
SCN9A-205ENST00000454569 ZNF451Q9Y4E5 1061 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 AP4S1Q9Y587 144 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 BOD1L1Q8NFC6 3051 aa10.07□□□□□ -0.8
SCN9A-205ENST00000454569 DSPP15924 2871 aaKnown RBP10.06□□□□□ -0.8
SCN9A-205ENST00000454569 OR6C70A6NIJ9 312 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 FFAR1O14842 300 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 SERPINB7O75635 380 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 PDE9AO76083 593 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 SOX30O94993 753 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 NTN1O95631 604 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 GPIP06744 558 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 GUSBP08236 651 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 NID1P14543 1247 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 IL12BP29460 328 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 AIMP2Q13155 320 aaKnown RBP10.06□□□□□ -0.8
SCN9A-205ENST00000454569 FGFBP1Q14512 234 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 MTX3Q5HYI7 312 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 TBCELQ5QJ74 424 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 ACER2Q5QJU3 275 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 DHRS4L2Q6PKH6 230 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 CBLN3Q6UW01 205 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 MDGA2Q7Z553 956 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 AMIGO2Q86SJ2 522 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 CARM1Q86X55 608 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 KRT73Q86Y46 540 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 PEX5LQ8IYB4 626 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 GALNT16Q8N428 558 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 POGLUT1Q8NBL1 392 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 OR6T1Q8NGN1 323 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 SPPL2AQ8TCT8 520 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 ZNF354BQ96LW1 612 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 IP6K3Q96PC2 410 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 PINK1Q9BXM7 581 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 ING2Q9H160 280 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 SEMA6AQ9H2E6 1030 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 PROK2Q9HC23 129 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 CPNE5Q9HCH3 593 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 GALNT9Q9HCQ5 603 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 ARMC1Q9NVT9 282 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 PLA2G3Q9NZ20 509 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 DKK4Q9UBT3 224 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 RAXQ9Y2V3 346 aa10.06□□□□□ -0.8
SCN9A-205ENST00000454569 YARS2Q9Y2Z4 477 aaKnown RBP10.06□□□□□ -0.8
SCN9A-205ENST00000454569 CDHR4A6H8M9 788 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 SERINC4A6NH21 518 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 ZNF891A8MT65 544 aaPredicted RBP10.05□□□□□ -0.8
SCN9A-205ENST00000454569 SCO2O43819 266 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 GMFGO60234 142 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 DBIP07108 87 aaKnown RBP10.05□□□□□ -0.8
SCN9A-205ENST00000454569 RAP2AP10114 183 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 UMPSP11172 480 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 TBXA2RP21731 343 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 PSMA4P25789 261 aaKnown RBP10.05□□□□□ -0.8
SCN9A-205ENST00000454569 PRKAR1BP31321 381 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 MAGEA2P43356 314 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 PTDSS1P48651 473 aaKnown RBP10.05□□□□□ -0.8
SCN9A-205ENST00000454569 SSR4P51571 173 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 CCL11P51671 97 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 ZNF136P52737 540 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 IST1P53990 364 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 GAS1P54826 345 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 NRG3P56975 720 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 CHRNB3Q05901 458 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 FOXD4Q12950 439 aaPredicted RBP10.05□□□□□ -0.8
SCN9A-205ENST00000454569 NTRK2Q16620 822 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 NRF1Q16656 503 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 IFI44LQ53G44 452 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 OR5M10Q6IEU7 315 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 LINC00696Q6ZRV3 163 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 TMEM179BQ7Z7N9 219 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 ZDHHC21Q8IVQ6 265 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 TAGAPQ8N103 731 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 TMEM102Q8N9M5 508 aaPredicted RBP10.05□□□□□ -0.8
SCN9A-205ENST00000454569 RNF138Q8WVD3 245 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 THAP4Q8WY91 577 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 SPACA9Q96E40 222 aaPredicted RBP10.05□□□□□ -0.8
SCN9A-205ENST00000454569 FER1L6-AS2Q96M78 137 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 ARHGDIGQ99819 225 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 UGT2B28Q9BY64 529 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 DPH1Q9BZG8 443 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 LHPPQ9H008 270 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 ZNF552Q9H707 407 aaPredicted RBP10.05□□□□□ -0.8
SCN9A-205ENST00000454569 NTN4Q9HB63 628 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 IL1RAPQ9NPH3 570 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 CTPS2Q9NRF8 586 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 UBQLN4Q9NRR5 601 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 DNAJB12Q9NXW2 375 aaKnown RBP10.05□□□□□ -0.8
SCN9A-205ENST00000454569 STMN3Q9NZ72 180 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 NDUFAF4Q9P032 175 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 RHCGQ9UBD6 479 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 DTNAQ9Y4J8 743 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 KCNMB2Q9Y691 235 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 CHCHD2Q9Y6H1 151 aaPredicted RBP10.05□□□□□ -0.8
SCN9A-205ENST00000454569 G3V3Y1 287 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 AP3D1O14617 1153 aa10.05□□□□□ -0.8
SCN9A-205ENST00000454569 IFNA14P01570 189 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms