RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 PSMB1P20618 241 aaKnown RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ENPP1P22413 925 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PSMA4P25789 261 aaKnown RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PHBP35232 272 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 KRT6CP48668 564 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CCR4P51679 360 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF41P51814 821 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 EEFSECP57772 596 aaKnown RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TRA2BP62995 288 aaKnown RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IRX1P78414 480 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF117Q03924 483 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C2orf80Q0P641 193 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 LCP2Q13094 533 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 FGFBP1Q14512 234 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TOMM34Q15785 309 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TSNAXIP1Q2TAA8 658 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TMEM249Q2WGJ8 235 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CHRFAM7AQ494W8 412 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF672Q499Z4 452 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SPIN4Q56A73 249 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF678Q5SXM1 525 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CLEC6AQ6EIG7 209 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 FAM71E1Q6IPT2 247 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CBLN3Q6UW01 205 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SYT10Q6XYQ8 523 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CYS1Q717R9 158 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CCDC91Q7Z6B0 441 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TUSC5Q8IXB3 177 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GSPT2Q8IYD1 628 aaKnown RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GTPBP8Q8N3Z3 284 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TMCO5AQ8N6Q1 288 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CCNYL1Q8N7R7 359 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF614Q8N883 585 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 NOA1Q8NC60 698 aaKnown RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SLC16A11Q8NCK7 471 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 OR2W6PQ8NHA6 318 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 METTL6Q8TCB7 284 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 KISS1RQ969F8 398 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C11orf24Q96F05 449 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CHMP6Q96FZ7 201 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C16orf58Q96GQ5 468 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 KLHL15Q96M94 604 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF300Q96RE9 604 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 LMF2Q9BU23 707 aaKnown RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CACNG6Q9BXT2 260 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 POTEKPQ9BYX7 375 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TRIM2Q9C040 744 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GSTO2Q9H4Y5 243 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CXorf36Q9H7Y0 433 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GRPEL1Q9HAV7 217 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 MID1IP1Q9NPA3 183 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 KLHL13Q9P2N7 655 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GIMAP2Q9UG22 337 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 C19orf53Q9UNZ5 99 aaPredicted RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 MRPS18CQ9Y3D5 142 aaKnown RBP5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 AP4B1Q9Y6B7 739 aa5.32□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CMYA5Q8N3K9 4069 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ARFGEF3Q5TH69 2177 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 A0A087WV62 115 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IGLV3-32A0A0A0MS00 114 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 EXOC1LA0A1B0GW35 172 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 A8MV72 311 aaPredicted RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 TMEM233B4DJY2 109 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 SHISA9B4DS77 424 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF814B7Z6K7 855 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ALG1L2C9J202 215 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ABCD4O14678 606 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ADAMDEC1O15204 470 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PDPK1O15530 556 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 EFNA2O43921 213 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ULK1O75385 1050 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 RAD51DO75771 328 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 BCAS2O75934 225 aaPredicted RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 KCNK2O95069 426 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 KCNH1O95259 989 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 H6PDO95479 791 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 NUDT14O95848 222 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 HSD3B1P14060 373 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PPP3CBP16298 524 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ME2P23368 584 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IGFBP5P24593 272 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 HSD3B2P26439 372 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GCAP28676 217 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ECHS1P30084 290 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 MPIP34949 423 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 GPC1P35052 558 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNF83P51522 516 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 NUDT6P53370 316 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CASP9P55211 416 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 RPS26P62854 115 aaKnown RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 EEF1A1P68104 462 aaKnown RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 PRR5P85299 388 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 CAV1Q03135 178 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 HEPACAMQ14CZ8 416 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 ZNHIT3Q15649 155 aaPredicted RBP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 IMPG1Q17R60 797 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 NCMAPQ5T1S8 102 aa5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.31□□□□□ -1.56
HLA-DPA3-207ENST00000454398 EEF1A1P5Q5VTE0 462 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms