RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 TTC9Q92623 222 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 ANKRD9Q96BM1 317 aaPredicted RBP14.74□□□□□ -0.05
SNX17-204ENST00000453453 C7orf34Q96L11 122 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 CEP19Q96LK0 163 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 TAAR9Q96RI9 348 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 RHNO1Q9BSD3 238 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 TRAF4Q9BUZ4 470 aaPredicted RBP14.74□□□□□ -0.05
SNX17-204ENST00000453453 MARCH7Q9H992 704 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 RASSF1Q9NS23 344 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 C14orf105Q9NVL8 296 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 PISDQ9UG56 409 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 KIF26BQ2KJY2 2108 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 SYNDIG1LA6NDD5 238 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 ATP1B1P05026 303 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 PIPP12273 146 aaPredicted RBP14.74□□□□□ -0.05
SNX17-204ENST00000453453 CEACAM1P13688 526 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 GABRB1P18505 474 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 ENDOUP21128 410 aaKnown RBP14.74□□□□□ -0.05
SNX17-204ENST00000453453 PCGF2P35227 344 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 TGFBR1P36897 503 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 GNG2P59768 71 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 ERV3-1Q14264 604 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 MINDY4Q4G0A6 757 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 TMEM164Q5U3C3 297 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 ZNF517Q6ZMY9 492 aaPredicted RBP14.74□□□□□ -0.05
SNX17-204ENST00000453453 QSOX2Q6ZRP7 698 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 PTOV1Q86YD1 416 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 C10orf111Q8N326 155 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 STX19Q8N4C7 294 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 OR56A1Q8NGH5 318 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 OR9A2Q8NGT5 310 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 WDR36Q8NI36 951 aaKnown RBP14.74□□□□□ -0.05
SNX17-204ENST00000453453 ANGPTL6Q8NI99 470 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 DGAT2Q96PD7 388 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 DDA1Q9BW61 102 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 ULBP3Q9BZM4 244 aa14.74□□□□□ -0.05
SNX17-204ENST00000453453 SIRT3Q9NTG7 399 aaPredicted RBP14.74□□□□□ -0.05
SNX17-204ENST00000453453 FER1L5A0AVI2 2057 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 hCG_2039718K7EN88 272 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 PLD2O14939 933 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 EMC8O43402 210 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 TRIM3O75382 744 aaPredicted RBP14.73□□□□□ -0.05
SNX17-204ENST00000453453 DKK1O94907 266 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 ONECUT2O95948 504 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 NT5EP21589 574 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 ANXA11P50995 505 aaKnown RBP14.73□□□□□ -0.05
SNX17-204ENST00000453453 NKX2-5P52952 324 aaPredicted RBP14.73□□□□□ -0.05
SNX17-204ENST00000453453 CLDN6P56747 220 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 MRPS15P82914 257 aaKnown RBP14.73□□□□□ -0.05
SNX17-204ENST00000453453 DUSP2Q05923 314 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 C19orf57Q0VDD7 668 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 TP53BP2Q13625 1128 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 XKRXQ6PP77 449 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 TMEM107Q6UX40 140 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 LIX1LQ8IVB5 337 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 CELF2-AS1Q8N7Q2 184 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 SLC38A9Q8NBW4 561 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 OR52N2Q8NGI0 321 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 NEURL3Q96EH8 262 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 RBM18Q96H35 190 aaKnown RBP14.73□□□□□ -0.05
SNX17-204ENST00000453453 ST6GAL2Q96JF0 529 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 SLC35G5Q96KT7 338 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 LRFN5Q96NI6 719 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 PTCHD1Q96NR3 888 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 TRNT1Q96Q11 434 aaKnown RBP14.73□□□□□ -0.05
SNX17-204ENST00000453453 SDHCQ99643 169 aaPredicted RBP14.73□□□□□ -0.05
SNX17-204ENST00000453453 TGIF2Q9GZN2 237 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 SMURF1Q9HCE7 757 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 DIABLOQ9NR28 239 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 LANCL2Q9NS86 450 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 ZCCHC3Q9NUD5 404 aaKnown RBP14.73□□□□□ -0.05
SNX17-204ENST00000453453 PTGFRNQ9P2B2 879 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 GPN3Q9UHW5 284 aaPredicted RBP14.73□□□□□ -0.05
SNX17-204ENST00000453453 ACSL6Q9UKU0 697 aa14.73□□□□□ -0.05
SNX17-204ENST00000453453 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.73□□□□□ -0.05
SNX17-204ENST00000453453 ZFHX2Q9C0A1 2572 aaPredicted RBP14.72□□□□□ -0.05
SNX17-204ENST00000453453 A0A1W2PS29 197 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 ARRDC5A6NEK1 342 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 C9J4A7 227 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 MEN1O00255 615 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 CCRL2O00421 344 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 YES1P07947 543 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 IFI6P09912 130 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 MAOAP21397 527 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 RORAP35398 523 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 CRATP43155 626 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 BTG2P78543 158 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 IGLV3-21P80748 117 aaPredicted RBP14.72□□□□□ -0.05
SNX17-204ENST00000453453 SAXO2Q658L1 398 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 COX15Q7KZN9 410 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 C6orf120Q7Z4R8 191 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 CACTIN-AS1Q8N1I8 211 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 ELP4Q96EB1 424 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 RNF31Q96EP0 1072 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 DDX28Q9NUL7 540 aaKnown RBP14.72□□□□□ -0.05
SNX17-204ENST00000453453 AASSQ9UDR5 926 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 TBC1D24Q9ULP9 559 aa14.72□□□□□ -0.05
SNX17-204ENST00000453453 SEC16AO15027 2179 aa14.71□□□□□ -0.05
SNX17-204ENST00000453453 SEC14L5O43304 696 aa14.71□□□□□ -0.05
SNX17-204ENST00000453453 SUV39H1O43463 412 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms